C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C, eta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021527 Prkch-001 ENSMUSG00000021108 10090 + 12:73584797-73778185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021527 7.273±1.10 1.853±0.39 7.219±2.38 2.276±0.24 8.937±1.81 2.721±0.53 4.875±0.25 4.662±0.22 0.993±0.44 24.467±1.31 2.072±0.36 3.217±0.89 15.356±5.44 0.411±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006H CIL_00006H_0002 CGP 12:73584797-73947530

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004699 IEA calcium-independent protein kinase C activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006468 ISS protein phosphorylation
GO:0010744 IMP positive regulation of macrophage derived foam cell differentiation
GO:0016020 IEA membrane
GO:0017160 IPI Ral GTPase binding
GO:0019899 IEA enzyme binding
GO:0034351 ISS negative regulation of glial cell apoptotic process
GO:0045618 IMP positive regulation of keratinocyte differentiation
GO:0046872 IEA metal ion binding
GO:0050861 ISS positive regulation of B cell receptor signaling pathway
GO:0051092 ISS positive regulation of NF-kappaB transcription factor activity
GO:0060252 ISS positive regulation of glial cell proliferation
GO:0070062 IEA extracellular vesicular exosome
GO:0070528 IEA protein kinase C signaling
GO:2000810 ISS regulation of tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332981 PRKCH-001 protein_coding Homo_sapiens 0 2830
ENST00000536400 PRKCH-003 processed_transcript Homo_sapiens 0 963
ENST00000553265 PRKCH-021 protein_coding Homo_sapiens 0 547
ENST00000553726 PRKCH-020 protein_coding Homo_sapiens 0 558
ENST00000553830 PRKCH-017 protein_coding Homo_sapiens 0 333
ENST00000553831 PRKCH-019 protein_coding Homo_sapiens 0 525
ENST00000553846 PRKCH-024 processed_transcript Homo_sapiens 0 531
ENST00000553889 PRKCH-007 processed_transcript Homo_sapiens 0 538
ENST00000555082 PRKCH-002 protein_coding Homo_sapiens 0 2180
ENST00000555382 PRKCH-010 processed_transcript Homo_sapiens 0 577
ENST00000555542 PRKCH-015 protein_coding Homo_sapiens 0 224
ENST00000555604 PRKCH-013 processed_transcript Homo_sapiens 0 209
ENST00000555628 PRKCH-025 processed_transcript Homo_sapiens 0 551
ENST00000555906 PRKCH-023 protein_coding Homo_sapiens 0 484
ENST00000556164 PRKCH-022 protein_coding Homo_sapiens 0 484
ENST00000556245 PRKCH-004 processed_transcript Homo_sapiens 0 435
ENST00000556347 RP11-47I22.4-001 protein_coding Homo_sapiens 0 505
ENST00000556778 PRKCH-028 protein_coding Homo_sapiens 0 608
ENST00000557294 PRKCH-027 protein_coding Homo_sapiens 0 555
ENST00000557473 PRKCH-006 protein_coding Homo_sapiens 0 507
ENST00000557559 PRKCH-008 processed_transcript Homo_sapiens 0 316
ENST00000557585 PRKCH-005 protein_coding Homo_sapiens 0 1044
ENST00000557599 PRKCH-011 processed_transcript Homo_sapiens 0 749
ENST00000559594 RP11-643G16.3-001 processed_pseudogene Homo_sapiens 0 252

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