C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phenylalanine-tRNA synthetase 2 (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021857 Fars2-201 ENSMUSG00000021420 10090 + 13:36117411-36537592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021857
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021857 16.085±2.85 11.340±1.69 8.867±0.96 5.920±1.75 14.799±3.70 14.282±3.98 29.191±2.05 25.128±6.27 11.381±3.22 12.029±0.83 9.522±0.75 13.796±4.44 7.068±2.17 21.305±10.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005I CIL_00005I_0002 CGP 13:35978797-36537592
CIL_00005H CIL_00005H_0002 CGP 13:36117411-36734477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 ISS tRNA binding
GO:0000287 IEA magnesium ion binding
GO:0004826 ISS phenylalanine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006432 ISS phenylalanyl-tRNA aminoacylation
GO:0008033 ISS tRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274680 FARS2-001 protein_coding Homo_sapiens 0 1351
ENST00000324331 FARS2-003 protein_coding Homo_sapiens 0 1345

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