C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phenylalanyl-tRNA synthetase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274680 FARS2-001 ENSG00000145982 9606 + 6:5261526-5771580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274680 3.988±0.00 8.622±0.00 3.309±0.00 4.352±0.87 5.559±1.52 3.758±0.29 4.570±0.07 5.244±0.47 5.607±0.08 6.239±0.36 3.827±0.17 5.360±3.78 7.778±0.80 8.552±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005I CIL_00005I_0001 CGP 6:5102593-5771580
CIL_00005H CIL_00005H_0001 CGP 6:5261044-6007605

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IDA:IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004826 IDA:IEA phenylalanine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005759 TAS mitochondrial matrix
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006432 IDA:IEA phenylalanyl-tRNA aminoacylation
GO:0008033 IDA:IEA tRNA processing
GO:0010467 TAS gene expression
GO:0043039 IEA tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021857 Fars2-201 protein_coding Mus_musculus 0 1351

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