C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AU RNA binding protein/enoyl-CoA hydratase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375731 AUH-001 ENSG00000148090 9606 - 9:91213815-91361913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000375731
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000375731 3.788±0.00 3.525±0.00 6.943±0.00 6.897±3.59 3.549±1.77 6.367±0.00 11.566±0.00 14.946±0.00 6.156±0.00 3.952±1.41 5.200±1.17 4.339±1.59 4.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JN CIL_0002JN_0001 CGP 9:90801787-91361913
CIL_00068X CIL_00068X_0001 CGP 9:91213815-91423862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0003824 IEA catalytic activity
GO:0004300 IDA enoyl-CoA hydratase activity
GO:0004490 EXP methylglutaconyl-CoA hydratase activity
GO:0005739 ISS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006552 IEA leucine catabolic process
GO:0008152 IEA metabolic process
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021913 Auh-001 protein_coding Mus_musculus 0 939
ENSMUST00000137064 Auh-006 nonsense_mediated_decay Mus_musculus 0 693
ENSMUST00000123599 Auh-008 protein_coding Mus_musculus 0 593
ENSMUST00000128380 Auh-005 retained_intron Mus_musculus 0 512
ENSMUST00000120535 Auh-004 protein_coding Mus_musculus 0 377
ENSMUST00000119311 Auh-003 protein_coding Mus_musculus 0 291
ENSMUST00000110031 Auh-002 protein_coding Mus_musculus 0 289
ENSMUST00000132598 Auh-010 processed_transcript Mus_musculus 0 263
ENSMUST00000151469 Auh-007 processed_transcript Mus_musculus 4e-24 117

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