C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376083 AGTPBP1-005 ENSG00000135049 9606 - 9:85546539-85741818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000376083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000376083 3.503±0.00 2.160±0.00 0.239±0.00 3.900±0.59 0.592±0.00 0.494±0.00 1.366±0.00 1.790±0.00 2.122±0.00 1.647±0.00 1.060±0.86 0.706±0.17 2.716±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007E CIL_00007E_0002 CGP 9:84668551-85742029
CIL_0006G3 CIL_0006G3_0001 CGP 9:85546539-86022298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001754 ISS eye photoreceptor cell differentiation
GO:0004181 ISS:IEA metallocarboxypeptidase activity
GO:0005488 IEA binding
GO:0005739 ISS mitochondrion
GO:0005829 ISS cytosol
GO:0006508 IEA proteolysis
GO:0007005 ISS mitochondrion organization
GO:0008270 IEA zinc ion binding
GO:0015631 ISS tubulin binding
GO:0021702 ISS cerebellar Purkinje cell differentiation
GO:0021772 ISS olfactory bulb development
GO:0035609 ISS C-terminal protein deglutamylation
GO:0035610 ISS protein side chain deglutamylation
GO:0050905 ISS neuromuscular process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022040 Agtpbp1-001 protein_coding Mus_musculus 0 2505
ENSMUST00000169745 Agtpbp1-010 nonsense_mediated_decay Mus_musculus 0 2466
ENSMUST00000164215 Agtpbp1-002 protein_coding Mus_musculus 0 2045
ENSMUST00000170555 Agtpbp1-011 nonsense_mediated_decay Mus_musculus 0 1094
ENSMUST00000171606 Agtpbp1-003 protein_coding Mus_musculus 0 1094
ENSMUST00000109830 Agtpbp1-018 protein_coding Mus_musculus 0 1077
ENSMUST00000167593 Agtpbp1-008 nonsense_mediated_decay Mus_musculus 0 880
ENSMUST00000165477 Agtpbp1-009 nonsense_mediated_decay Mus_musculus 0 848
ENSMUST00000163149 Agtpbp1-013 protein_coding Mus_musculus 0 725
ENSMUST00000168141 Agtpbp1-019 processed_transcript Mus_musculus 0 643
ENSMUST00000165851 Agtpbp1-017 processed_transcript Mus_musculus 0 442

Loading