C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337006 AGTPBP1-201 ENSG00000135049 9606 - 9:85546540-85742029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLungMuscleTestisENST00000337006
Transcript ID Adipose Adrenal Brain Breast Heart Lung Muscle Testis
ENST00000337006 1.806±0.00 0.968±0.00 6.309±0.00 2.098±0.00 5.178±0.00 1.330±0.00 1.544±0.56 3.758±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007E CIL_00007E_0002 CGP 9:84668551-85742029
CIL_0006G3 CIL_0006G3_0001 CGP 9:85546539-86022298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001754 IEA eye photoreceptor cell differentiation
GO:0004181 IEA metallocarboxypeptidase activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 IEA cytosol
GO:0006508 IEA proteolysis
GO:0007005 IEA mitochondrion organization
GO:0007628 IEA adult walking behavior
GO:0008270 IEA zinc ion binding
GO:0015631 IEA tubulin binding
GO:0021549 IEA cerebellum development
GO:0021680 IEA cerebellar Purkinje cell layer development
GO:0021702 IEA cerebellar Purkinje cell differentiation
GO:0021772 IEA olfactory bulb development
GO:0035609 IEA C-terminal protein deglutamylation
GO:0035610 IEA protein side chain deglutamylation
GO:0042133 IEA neurotransmitter metabolic process
GO:0050905 IEA neuromuscular process
GO:0060041 IEA retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022040 Agtpbp1-001 protein_coding Mus_musculus 0 2505
ENSMUST00000169745 Agtpbp1-010 nonsense_mediated_decay Mus_musculus 0 2466
ENSMUST00000164215 Agtpbp1-002 protein_coding Mus_musculus 0 2045
ENSMUST00000170555 Agtpbp1-011 nonsense_mediated_decay Mus_musculus 0 1509
ENSMUST00000109830 Agtpbp1-018 protein_coding Mus_musculus 0 1509
ENSMUST00000171606 Agtpbp1-003 protein_coding Mus_musculus 0 1509
ENSMUST00000167593 Agtpbp1-008 nonsense_mediated_decay Mus_musculus 0 992
ENSMUST00000163149 Agtpbp1-013 protein_coding Mus_musculus 0 950
ENSMUST00000165477 Agtpbp1-009 nonsense_mediated_decay Mus_musculus 0 848
ENSMUST00000168141 Agtpbp1-019 processed_transcript Mus_musculus 0 643
ENSMUST00000165851 Agtpbp1-017 processed_transcript Mus_musculus 0 442
ENSMUST00000166585 Agtpbp1-014 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000167096 Agtpbp1-005 protein_coding Mus_musculus 0.0000000008 71

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