C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022224 Trappc13-003 ENSMUSG00000021711 10090 - 13:104143317-104178423 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022224
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022224 2.297±0.36 5.387±1.87 6.037±0.68 1.487±0.13 3.195±1.13 1.663±0.42 2.332±0.69 2.568±0.97 3.190±0.47 3.521±0.76 3.734±1.69 3.889±1.65 0.969±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231526 TRAPPC13-003 protein_coding Homo_sapiens 0 1467
ENST00000399438 TRAPPC13-001 protein_coding Homo_sapiens 0 1594
ENST00000438419 TRAPPC13-004 protein_coding Homo_sapiens 0 1598
ENST00000504243 TRAPPC13-009 nonsense_mediated_decay Homo_sapiens 0 688
ENST00000504751 TRAPPC13-008 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000505553 TRAPPC13-002 protein_coding Homo_sapiens 0 1476
ENST00000508304 TRAPPC13-013 retained_intron Homo_sapiens 0 723
ENST00000510585 CTC-534A2.2-001 protein_coding Homo_sapiens 3e-20 104
ENST00000512009 TRAPPC13-005 retained_intron Homo_sapiens 0 1112
ENST00000520525 TRAPPC13-014 retained_intron Homo_sapiens 0 472

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