C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000231526 TRAPPC13-003 ENSG00000113597 9606 + 5:65625040-65666069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000231526
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000231526 1.740±0.00 3.247±0.00 6.884±0.00 2.481±0.00 2.558±0.00 1.619±0.91 3.173±2.04 1.641±0.17 1.688±0.04 0.988±0.36 1.915±0.71 1.509±0.39 2.502±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G9 CIL_0007G9_0002 CGP 5:65563236-65625975

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144060 Trappc13-001 protein_coding Mus_musculus 0 1550
ENSMUST00000141557 Trappc13-002 protein_coding Mus_musculus 0 1482
ENSMUST00000179891 Trappc13-201 protein_coding Mus_musculus 0 1467
ENSMUST00000022224 Trappc13-003 protein_coding Mus_musculus 0 1467
ENSMUST00000142745 Trappc13-005 retained_intron Mus_musculus 0 418
ENSMUST00000133280 Trappc13-004 processed_transcript Mus_musculus 3e-17 95

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