C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021711 Trappc13 10090 - 13:104142149-104178469 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022224 Trappc13-003 104143317-104178423 protein_coding
  ENSMUST00000133280 Trappc13-004 104173722-104178439 processed_transcript
  ENSMUST00000141557 Trappc13-002 104142156-104178425 protein_coding
  ENSMUST00000142745 Trappc13-005 104166550-104178459 retained_intron
  ENSMUST00000144060 Trappc13-001 104142149-104178469 protein_coding
  ENSMUST00000179891 Trappc13-201 104143954-104178407 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022224ENSMUST00000133280ENSMUST00000141557ENSMUST00000144060ENSMUST00000179891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022224 2.297±0.36 5.387±1.87 6.037±0.68 N/A 1.487±0.13 3.195±1.13 1.663±0.42 2.332±0.69 2.568±0.97 3.190±0.47 3.521±0.76 3.734±1.69 3.889±1.65 0.969±0.26
ENSMUST00000133280 N/A N/A N/A N/A N/A N/A N/A N/A 2.562±0.65 N/A N/A N/A 1.116±0.00 N/A
ENSMUST00000141557 2.771±0.56 3.202±0.80 1.700±0.27 4.175±0.00 1.854±0.61 2.215±1.00 1.397±0.28 2.524±0.53 1.670±0.55 1.821±0.20 1.765±0.51 2.561±1.03 2.970±1.16 0.574±0.00
ENSMUST00000144060 1.396±0.37 1.424±0.64 1.451±0.40 6.757±0.00 1.124±0.30 1.594±0.00 0.626±0.14 0.817±0.11 1.163±0.26 1.483±0.00 N/A 2.032±0.31 N/A N/A
ENSMUST00000179891 4.212±0.78 1.825±0.00 N/A N/A 2.795±0.73 3.078±0.35 2.016±0.11 2.996±0.41 1.967±0.64 2.110±0.42 N/A 4.387±1.62 6.723±2.94 1.035±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033768 trappc13 trafficking protein particle complex 13 protein_coding Danio_rerio
ENSG00000113597 TRAPPC13 trafficking protein particle complex 13 protein_coding Homo_sapiens

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