C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022511 Zmym2-201 ENSMUSG00000021945 10090 + 14:56887795-56962579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022511
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022511 2.113±0.78 4.109±0.73 4.691±0.00 6.993±0.41 3.369±1.37 2.914±1.14 1.552±0.73 2.409±0.63 1.792±0.28 2.106±0.73 2.461±1.43 3.842±2.17 5.113±1.32 2.591±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SJ CIL_0003SJ_0002 CGP 14:56790585-56962579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016605 IEA PML body
GO:0031624 IEA ubiquitin conjugating enzyme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337963 ZMYM5-201 protein_coding Homo_sapiens 0 599
ENST00000382870 ZMYM2-001 retained_intron Homo_sapiens 0 4128
ENST00000382871 ZMYM2-005 protein_coding Homo_sapiens 0 6739
ENST00000382874 ZMYM2-003 protein_coding Homo_sapiens 0 6743
ENST00000382881 ZMYM2-004 retained_intron Homo_sapiens 0 1186
ENST00000382883 ZMYM2-009 retained_intron Homo_sapiens 0 4516
ENST00000382905 ZMYM5-003 protein_coding Homo_sapiens 0 455
ENST00000382907 ZMYM5-001 protein_coding Homo_sapiens 0 303
ENST00000382909 ZMYM5-002 retained_intron Homo_sapiens 0 784
ENST00000467542 ZMYM5-004 retained_intron Homo_sapiens 0 865
ENST00000468677 ZMYM2-006 processed_transcript Homo_sapiens 0 483
ENST00000490152 ZMYM2-008 processed_transcript Homo_sapiens 0 302
ENST00000490422 ZMYM2-002 processed_transcript Homo_sapiens 0 508
ENST00000494061 ZMYM2-007 retained_intron Homo_sapiens 0 1197
ENST00000495534 ZMYM5-005 retained_intron Homo_sapiens 0 518
ENST00000502168 ZMYM5-006 protein_coding Homo_sapiens 0 599
ENST00000535942 ZMYM5-007 retained_intron Homo_sapiens 0 518
ENST00000610343 ZMYM2-201 protein_coding Homo_sapiens 0 6789
ENST00000610795 ZMYM2-202 protein_coding Homo_sapiens 0 6743
ENST00000620447 ZMYM2-010 protein_coding Homo_sapiens 0 656

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