C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002EJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152193-ENSG00000139746 CGP 9606 13:78614291-79406477
GeneTranscriptPositionBiotype
ENSG00000139746 (RBM26)
RNA binding motif protein 26 		ENST00000267229 (RBM26-002) 79319954-79405788 protein_coding
ENST00000438724 (RBM26-201) 79318868-79406221 protein_coding
ENST00000438737 (RBM26-004) 79319954-79406215 protein_coding
ENST00000449987 (RBM26-006) 79311824-79341212 protein_coding
ENST00000461008 (RBM26-003) 79365760-79366710 processed_transcript
ENST00000472143 (RBM26-005) 79376217-79406477 retained_intron
ENST00000622611 (RBM26-202) 79318868-79406221 protein_coding
ENSG00000152193 (RNF219)
ring finger protein 219 		ENST00000282003 (RNF219-001) 78614291-78659179 protein_coding
ENSG00000215357 (HSPD1P8)
heat shock 60kDa protein 1 (chaperonin) pseudogene 8 		ENST00000400121 (HSPD1P8-001) 78849231-78851208 processed_pseudogene
ENSG00000225427 (LINC00331)
long intergenic non-protein coding RNA 331 		ENST00000446391 (LINC00331-001) 78787319-78792307 lincRNA
ENSG00000226670 (BCAS2P3)
breast carcinoma amplified sequence 2 pseudogene 3 		ENST00000416374 (BCAS2P3-001) 79166119-79166885 processed_pseudogene
ENSG00000230584 (CCT5P2)
chaperonin containing TCP1, subunit 5 (epsilon) pseudogene 2 		ENST00000432974 (CCT5P2-001) 78908919-78910542 processed_pseudogene
ENSG00000236277 (NIPA2P5)
non imprinted in Prader-Willi/Angelman syndrome 2 pseudogene 5 		ENST00000452282 (NIPA2P5-001) 79090783-79094119 processed_pseudogene
ENSG00000237109 (RPL21P111)
ribosomal protein L21 pseudogene 111 		ENST00000418453 (RPL21P111-001) 78761175-78761651 processed_pseudogene
ENSG00000252496 (RNA5SP33)
RNA, 5S ribosomal pseudogene 33 		ENST00000516687 (RNA5SP33-201) 79389534-79389631 rRNA
ENSG00000263868 (AL139319.1)
 ENST00000580901 (AL139319.1-201) 78665838-78665930 miRNA
CIL_0002EJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022120-ENSMUSG00000022119 CGP 10090 14:104477534-105177327
GeneTranscriptPositionBiotype
ENSMUSG00000022119 (Rbm26)
RNA binding motif protein 26 		ENSMUST00000022715 (Rbm26-007) 105115063-105177327 protein_coding
ENSMUST00000100327 (Rbm26-001) 105114986-105177323 protein_coding
ENSMUST00000163499 (Rbm26-002) 105116135-105177264 protein_coding
ENSMUST00000163545 (Rbm26-006) 105114965-105176860 protein_coding
ENSMUST00000172122 (Rbm26-004) 105106751-105130337 protein_coding
ENSMUSG00000022120 (Rnf219)
ring finger protein 219 		ENSMUST00000022716 (Rnf219-201) 104477534-104522666 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EJ_0001ENSG00000139746ENST00000267229ENST00000438724ENST00000438737ENST00000449987ENST00000461008ENST00000472143ENST00000622611ENSG00000152193ENST00000282003ENSG00000215357ENST00000400121ENSG00000225427ENST00000446391ENSG00000226670ENST00000416374ENSG00000230584ENST00000432974ENSG00000236277ENST00000452282ENSG00000237109ENST00000418453ENSG00000252496ENST00000516687ENSG00000263868ENST00000580901CIL_0002EJ_0002ENSMUSG00000022119ENSMUST00000022715ENSMUST00000100327ENSMUST00000163499ENSMUST00000163545ENSMUST00000172122ENSMUSG00000022120ENSMUST00000022716
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EJ_0001ENSG00000139746ENST00000267229ENST00000438724ENST00000438737ENST00000449987ENST00000622611ENSG00000152193ENST00000282003ENSG00000215357ENST00000400121ENSG00000225427ENST00000446391ENSG00000226670ENST00000416374ENSG00000230584ENST00000432974ENSG00000236277ENST00000452282ENSG00000237109ENST00000418453ENSG00000252496ENST00000516687ENSG00000263868ENST00000580901CIL_0002EJ_0002ENSMUSG00000022119ENSMUST00000022715ENSMUST00000100327ENSMUST00000163499ENSMUST00000163545ENSMUST00000172122ENSMUSG00000022120ENSMUST00000022716
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139746 ENST00000267229 2.219±0.00 N/A 2.572±0.00 4.245±0.00 4.076±0.00 3.572±0.88 1.223±0.00 1.610±0.69 3.196±0.00 5.392±0.00 0.800±0.00 3.861±0.81 2.451±1.63 7.711±3.41
ENST00000438724 1.528±0.00 4.959±0.00 N/A 1.341±0.00 3.350±1.42 N/A 1.655±0.00 1.918±1.07 1.181±0.00 2.806±0.29 N/A 2.897±0.13 1.164±0.47 2.477±0.21
ENST00000438737 2.321±0.00 N/A N/A 4.002±0.00 N/A 4.266±0.00 1.005±0.37 N/A 2.113±0.00 N/A 1.717±0.00 4.654±0.00 0.569±0.00 N/A
ENST00000449987 1.750±0.00 7.020±0.00 N/A 3.210±0.00 3.819±1.06 N/A N/A 3.322±0.00 1.272±0.00 2.585±0.52 1.638±0.00 3.699±0.41 0.657±0.00 7.943±0.00
ENST00000461008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622611 N/A N/A N/A 1.870±0.00 1.140±0.00 N/A N/A 1.273±0.00 0.360±0.00 1.134±0.00 0.970±0.00 1.412±0.00 N/A N/A
ENSG00000152193 ENST00000282003 N/A 3.718±0.00 0.738±0.00 4.821±0.67 3.542±0.23 N/A 1.623±0.72 N/A 1.972±0.00 3.519±0.00 0.831±0.54 5.193±1.94 3.836±0.00 11.739±0.64
ENSG00000215357 ENST00000400121 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A 0.018±0.01
ENSG00000225427 ENST00000446391 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.523±0.19
ENSG00000226670 ENST00000416374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A
ENSG00000230584 ENST00000432974 0.016±0.00 0.016±0.00 N/A N/A N/A 0.007±0.00 0.007±0.00 0.008±0.00 N/A 0.160±0.00 0.078±0.00 N/A N/A 0.014±0.00
ENSG00000236277 ENST00000452282 N/A 0.024±0.00 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237109 ENST00000418453 0.125±0.00 0.231±0.00 N/A 0.025±0.00 0.123±0.00 0.047±0.00 N/A 0.025±0.00 N/A 0.093±0.00 0.046±0.00 0.282±0.24 N/A 0.114±0.00
ENSG00000252496 ENST00000516687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.349±0.00 N/A N/A
ENSG00000263868 ENST00000580901 N/A N/A N/A N/A 1.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022119 ENSMUST00000022715 3.586±2.52 3.357±1.16 N/A 5.637±0.65 2.496±1.09 2.545±0.66 1.516±0.16 1.242±0.09 1.694±0.37 3.689±1.46 1.050±0.12 8.033±3.80 10.229±0.00 14.102±8.61
ENSMUST00000100327 1.805±1.15 8.333±2.71 N/A N/A 4.887±2.18 4.043±1.93 0.711±0.00 1.632±0.32 1.257±0.67 1.714±0.46 N/A 10.183±1.89 4.819±1.32 2.839±0.21
ENSMUST00000163499 0.776±0.00 N/A N/A N/A N/A N/A N/A 0.781±0.00 N/A 1.003±0.02 N/A N/A 1.761±0.41 N/A
ENSMUST00000163545 N/A 2.862±0.07 N/A 2.245±0.00 2.102±0.43 1.529±0.00 1.177±0.00 N/A N/A 2.004±0.00 N/A 3.709±1.24 3.331±0.00 N/A
ENSMUST00000172122 N/A N/A 4.374±0.87 7.718±4.49 N/A N/A N/A N/A 4.856±1.69 2.836±0.15 1.349±0.28 2.591±0.00 4.281±2.75 N/A
ENSMUSG00000022120 ENSMUST00000022716 1.683±0.95 1.279±0.23 2.630±0.15 4.870±0.85 1.256±0.20 1.759±0.24 0.863±0.24 0.959±0.13 1.336±1.16 2.007±0.23 0.627±0.10 4.304±0.86 1.344±0.51 2.865±0.80

Loading