C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007M3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
POU4F1 UCNEbase 9606 13:78239925-79269621
GeneTranscriptPositionBiotype
ENSG00000152192 (POU4F1)
POU class 4 homeobox 1 		ENST00000377208 (POU4F1-001) 78598362-78603560 protein_coding
ENSG00000152193 (RNF219)
ring finger protein 219 		ENST00000282003 (RNF219-001) 78614291-78659179 protein_coding
ENSG00000215357 (HSPD1P8)
heat shock 60kDa protein 1 (chaperonin) pseudogene 8 		ENST00000400121 (HSPD1P8-001) 78849231-78851208 processed_pseudogene
ENSG00000225427 (LINC00331)
long intergenic non-protein coding RNA 331 		ENST00000446391 (LINC00331-001) 78787319-78792307 lincRNA
ENSG00000226670 (BCAS2P3)
breast carcinoma amplified sequence 2 pseudogene 3 		ENST00000416374 (BCAS2P3-001) 79166119-79166885 processed_pseudogene
ENSG00000229865 (RPL31P54)
ribosomal protein L31 pseudogene 54 		ENST00000429803 (RPL31P54-001) 78422823-78423192 processed_pseudogene
ENSG00000230584 (CCT5P2)
chaperonin containing TCP1, subunit 5 (epsilon) pseudogene 2 		ENST00000432974 (CCT5P2-001) 78908919-78910542 processed_pseudogene
ENSG00000236277 (NIPA2P5)
non imprinted in Prader-Willi/Angelman syndrome 2 pseudogene 5 		ENST00000452282 (NIPA2P5-001) 79090783-79094119 processed_pseudogene
ENSG00000237109 (RPL21P111)
ribosomal protein L21 pseudogene 111 		ENST00000418453 (RPL21P111-001) 78761175-78761651 processed_pseudogene
ENSG00000263868 (AL139319.1)
 ENST00000580901 (AL139319.1-201) 78665838-78665930 miRNA
ENSG00000271386 (SRGNP1)
serglycin pseudogene 1 		ENST00000603392 (SRGNP1-001) 78285838-78286288 processed_pseudogene
ENSG00000271776 (RP11-52L5.6)
 ENST00000607269 (RP11-52L5.6-001) 78596129-78599619 antisense
CIL_0007M3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
POU4F1 UCNEbase 10090 14:104145568-105070718
GeneTranscriptPositionBiotype
ENSMUSG00000022120 (Rnf219)
ring finger protein 219 		ENSMUST00000022716 (Rnf219-201) 104477534-104522666 protein_coding
ENSMUSG00000048349 (Pou4f1)
POU domain, class 4, transcription factor 1 		ENSMUST00000053016 (Pou4f1-001) 104461676-104467999 protein_coding
ENSMUST00000139505 (Pou4f1-002) 104463973-104465365 processed_transcript
CIL_0007M3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
POU4F1 UCNEbase 7955 6:4285789-4521025
GeneTranscriptPositionBiotype
ENSDARG00000005559 (pou4f1)
POU domain, class 4, transcription factor 1 		ENSDART00000025031 (pou4f1-201) 4432341-4435231 protein_coding
ENSDARG00000090904 (RNF219)
ring finger protein 219 		ENSDART00000122042 (RNF219-201) 4421265-4428564 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007M3_0001ENSG00000152192ENST00000377208ENSG00000152193ENST00000282003ENSG00000215357ENST00000400121ENSG00000225427ENST00000446391ENSG00000226670ENST00000416374ENSG00000229865ENST00000429803ENSG00000230584ENST00000432974ENSG00000236277ENST00000452282ENSG00000237109ENST00000418453ENSG00000263868ENST00000580901ENSG00000271386ENST00000603392ENSG00000271776ENST00000607269CIL_0007M3_0002ENSMUSG00000022120ENSMUST00000022716ENSMUSG00000048349ENSMUST00000053016ENSMUST00000139505CIL_0007M3_0003ENSDARG00000005559ENSDART00000025031ENSDARG00000090904ENSDART00000122042
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007M3_0001ENSG00000152192ENST00000377208ENSG00000152193ENST00000282003ENSG00000215357ENST00000400121ENSG00000225427ENST00000446391ENSG00000226670ENST00000416374ENSG00000229865ENST00000429803ENSG00000230584ENST00000432974ENSG00000236277ENST00000452282ENSG00000237109ENST00000418453ENSG00000263868ENST00000580901ENSG00000271386ENST00000603392ENSG00000271776ENST00000607269CIL_0007M3_0002ENSMUSG00000022120ENSMUST00000022716ENSMUSG00000048349ENSMUST00000053016ENSMUST00000139505CIL_0007M3_0003ENSDARG00000005559ENSDART00000025031ENSDARG00000090904ENSDART00000122042
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152192 ENST00000377208 N/A 0.009±0.00 N/A 0.046±0.00 0.006±0.00 0.017±0.00 0.021±0.00 N/A N/A 0.031±0.00 0.053±0.00 0.044±0.04 0.044±0.01 1.372±0.25
ENSG00000152193 ENST00000282003 N/A 3.718±0.00 0.738±0.00 4.821±0.67 3.542±0.23 N/A 1.623±0.72 N/A 1.972±0.00 3.519±0.00 0.831±0.54 5.193±1.94 3.836±0.00 11.739±0.64
ENSG00000215357 ENST00000400121 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A 0.018±0.01
ENSG00000225427 ENST00000446391 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.523±0.19
ENSG00000226670 ENST00000416374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A
ENSG00000229865 ENST00000429803 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A
ENSG00000230584 ENST00000432974 0.016±0.00 0.016±0.00 N/A N/A N/A 0.007±0.00 0.007±0.00 0.008±0.00 N/A 0.160±0.00 0.078±0.00 N/A N/A 0.014±0.00
ENSG00000236277 ENST00000452282 N/A 0.024±0.00 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237109 ENST00000418453 0.125±0.00 0.231±0.00 N/A 0.025±0.00 0.123±0.00 0.047±0.00 N/A 0.025±0.00 N/A 0.093±0.00 0.046±0.00 0.282±0.24 N/A 0.114±0.00
ENSG00000263868 ENST00000580901 N/A N/A N/A N/A 1.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271386 ENST00000603392 N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271776 ENST00000607269 N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.723±2.58
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022120 ENSMUST00000022716 1.683±0.95 1.279±0.23 2.630±0.15 4.870±0.85 1.256±0.20 1.759±0.24 0.863±0.24 0.959±0.13 1.336±1.16 2.007±0.23 0.627±0.10 4.304±0.86 1.344±0.51 2.865±0.80
ENSMUSG00000048349 ENSMUST00000053016 0.010±0.00 0.096±0.05 0.027±0.01 4.451±3.14 0.067±0.03 0.091±0.02 0.028±0.00 0.026±0.01 0.009±0.00 0.042±0.01 0.166±0.06 0.428±0.22 0.038±0.02 0.189±0.10
ENSMUST00000139505 N/A N/A N/A 0.509±0.00 N/A N/A 0.049±0.00 0.061±0.00 0.016±0.01 N/A 0.418±0.19 0.443±0.15 0.135±0.14 0.814±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005559 ENSDART00000025031 N/A N/A N/A 2.486±0.86 N/A N/A N/A 0.046±0.03 N/A N/A 0.274±0.00 N/A N/A N/A
ENSDARG00000090904 ENSDART00000122042 N/A N/A N/A 0.151±0.01 N/A N/A 0.026±0.00 0.893±0.00 0.094±0.00 N/A 0.072±0.00 N/A N/A N/A

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