C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022720 Fbxl3-001 ENSMUSG00000022124 10090 - 14:103080239-103099554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022720
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022720 5.321±2.99 8.436±3.09 3.028±0.93 5.801±2.19 9.831±4.25 3.114±1.34 6.103±1.90 2.808±0.48 14.267±1.44 1.684±0.12 12.170±3.33 2.543±0.86 1.880±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PQ CIL_0004PQ_0003 CGP 14:103070216-103099566
CIL_00004B CIL_00004B_0002 CGP 14:103080239-103346814

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 IDA cytosol
GO:0016567 IEA protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex
GO:0031146 ISS SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031648 IMP protein destabilization
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355619 FBXL3-001 protein_coding Homo_sapiens 0 2180
ENST00000417323 FBXL3-002 protein_coding Homo_sapiens 0 647
ENST00000470210 FBXL3-005 processed_transcript Homo_sapiens 0 394
ENST00000472949 FBXL3-003 processed_transcript Homo_sapiens 0 220
ENST00000477982 FBXL3-006 processed_transcript Homo_sapiens 0 329
ENST00000485797 FBXL3-004 processed_transcript Homo_sapiens 0 226

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