C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004PQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076339-ENSDARG00000078003 CGP 7955 9:17146474-17316134
GeneTranscriptPositionBiotype
ENSDARG00000060907 (cln5)
ceroid-lipofuscinosis, neuronal 5
ENSDART00000086302 (cln5-201) 17290044-17294881 protein_coding
ENSDARG00000070446 (RSPH1)
radial spoke head 1 homolog (Chlamydomonas)
ENSDART00000103390 (RSPH1-201) 17127997-17289317 protein_coding
ENSDARG00000076339 (CLN5 (2 of 2))
ceroid-lipofuscinosis, neuronal 5
ENSDART00000110866 (CLN5 (2 of 2)-201) 17146474-17148452 protein_coding
CIL_0004PQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102805-ENSG00000005812 CGP 9606 13:76990660-77027195
GeneTranscriptPositionBiotype
ENSG00000005812 (FBXL3)
F-box and leucine-rich repeat protein 3
ENST00000355619 (FBXL3-001) 77005254-77027150 protein_coding
ENST00000417323 (FBXL3-002) 77007565-77027195 protein_coding
ENST00000470210 (FBXL3-005) 77015165-77018744 processed_transcript
ENST00000472949 (FBXL3-003) 77015511-77027085 processed_transcript
ENST00000477982 (FBXL3-006) 76999137-77018686 processed_transcript
ENST00000485797 (FBXL3-004) 76992598-77015581 processed_transcript
ENSG00000102805 (CLN5)
ceroid-lipofuscinosis, neuronal 5
ENST00000377453 (CLN5-001) 76990660-77002517 protein_coding
ENST00000485938 (CLN5-002) 76992116-76996289 protein_coding
ENST00000616833 (CLN5-003) 76992084-77001808 protein_coding
CIL_0004PQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022125-ENSMUSG00000022124 CGP 10090 14:103070216-103099566
GeneTranscriptPositionBiotype
ENSMUSG00000022124 (Fbxl3)
F-box and leucine-rich repeat protein 3
ENSMUST00000022720 (Fbxl3-001) 103080239-103099554 protein_coding
ENSMUST00000123043 (Fbxl3-005) 103089452-103095748 protein_coding
ENSMUST00000127113 (Fbxl3-006) 103083105-103089817 retained_intron
ENSMUST00000132004 (Fbxl3-003) 103081684-103098975 protein_coding
ENSMUST00000144141 (Fbxl3-004) 103089414-103099566 protein_coding
ENSMUST00000145693 (Fbxl3-002) 103081034-103098999 protein_coding
ENSMUSG00000022125 (Cln5)
ceroid-lipofuscinosis, neuronal 5
ENSMUST00000022721 (Cln5-201) 103070216-103077579 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PQ_0001ENSDARG00000060907ENSDART00000086302ENSDARG00000070446ENSDART00000103390ENSDARG00000076339ENSDART00000110866CIL_0004PQ_0002ENSG00000005812ENST00000355619ENST00000417323ENST00000470210ENST00000472949ENST00000477982ENST00000485797ENSG00000102805ENST00000377453ENST00000485938ENST00000616833CIL_0004PQ_0003ENSMUSG00000022124ENSMUST00000022720ENSMUST00000123043ENSMUST00000127113ENSMUST00000132004ENSMUST00000144141ENSMUST00000145693ENSMUSG00000022125ENSMUST00000022721
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PQ_0001ENSDARG00000060907ENSDART00000086302ENSDARG00000070446ENSDART00000103390ENSDARG00000076339ENSDART00000110866CIL_0004PQ_0002ENSG00000005812ENST00000355619ENST00000417323ENST00000477982ENSG00000102805ENST00000377453ENST00000485938CIL_0004PQ_0003ENSMUSG00000022124ENSMUST00000022720ENSMUST00000123043ENSMUST00000127113ENSMUST00000132004ENSMUST00000144141ENSMUST00000145693ENSMUSG00000022125ENSMUST00000022721
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060907 ENSDART00000086302 N/A N/A N/A 0.555±0.14 N/A N/A 0.796±0.97 0.235±0.00 0.120±0.00 N/A N/A N/A N/A N/A
ENSDARG00000070446 ENSDART00000103390 N/A N/A N/A 1.426±0.97 N/A N/A 1.704±0.04 6.905±0.00 N/A N/A 0.382±0.00 N/A N/A N/A
ENSDARG00000076339 ENSDART00000110866 N/A N/A N/A 0.220±0.03 N/A N/A 0.145±0.00 0.623±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005812 ENST00000355619 15.484±0.00 15.273±0.00 2.016±0.00 9.390±4.21 8.463±4.41 8.184±3.65 4.028±1.82 7.500±5.43 4.615±0.37 8.511±0.59 4.176±3.30 7.396±3.57 7.312±1.32 15.794±6.28
ENST00000417323 N/A N/A N/A N/A N/A N/A N/A 7.601±0.00 8.487±0.00 N/A N/A N/A N/A N/A
ENST00000470210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477982 5.775±0.00 N/A 2.362±0.00 2.005±0.00 N/A 5.367±0.00 2.405±1.13 7.576±5.17 4.194±0.00 4.157±1.37 1.257±0.69 4.955±1.45 7.143±1.45 6.496±2.25
ENST00000485797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102805 ENST00000377453 N/A N/A N/A N/A N/A 2.410±0.00 N/A 4.617±0.00 N/A N/A N/A 2.914±0.00 2.655±0.20 N/A
ENST00000485938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.005±0.00 N/A N/A
ENST00000616833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022124 ENSMUST00000022720 5.321±2.99 8.436±3.09 N/A 3.028±0.93 5.801±2.19 9.831±4.25 3.114±1.34 6.103±1.90 2.808±0.48 14.267±1.44 1.684±0.12 12.170±3.33 2.543±0.86 1.880±0.27
ENSMUST00000123043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.673±0.00 N/A 8.010±0.00
ENSMUST00000127113 23.795±3.91 14.851±3.83 N/A 10.974±0.55 21.986±7.16 22.946±1.15 13.369±0.27 16.864±4.10 7.784±1.56 28.944±0.88 N/A 17.093±3.31 8.961±0.00 5.831±0.40
ENSMUST00000132004 4.155±0.00 N/A N/A 8.502±0.00 N/A N/A 3.511±0.41 3.943±0.52 N/A N/A 3.027±0.00 7.126±0.00 5.065±1.11 3.273±0.00
ENSMUST00000144141 N/A 10.933±0.00 N/A N/A N/A 12.979±0.00 N/A 12.375±0.00 N/A N/A N/A 13.616±2.05 N/A 6.262±0.48
ENSMUST00000145693 3.036±0.00 6.550±0.00 12.342±0.57 7.154±0.76 4.315±1.90 6.229±2.30 1.911±0.11 4.097±0.00 4.907±2.97 8.851±0.00 6.630±3.37 10.762±4.75 9.142±3.17 1.956±0.42
ENSMUSG00000022125 ENSMUST00000022721 22.817±8.80 48.215±4.77 10.720±1.13 2.644±0.94 22.490±6.66 26.270±8.60 7.937±0.37 16.623±3.01 11.428±3.22 19.883±3.31 5.266±1.30 19.794±9.58 16.659±6.96 1.414±0.53

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