C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB2B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022765 Rab2b-001 ENSMUSG00000022159 10090 - 14:52261759-52279545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainTestisENSMUST00000022765
Transcript ID Adipose Adrenal Bladder Brain Testis
ENSMUST00000022765 8.060±1.01 11.551±1.36 8.078±0.07 21.736±1.74 7.538±2.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JD CIL_0003JD_0002 CGP 14:52198151-52279545
CIL_0008CX CIL_0008CX_0002 VISTA 14:52247406-52849170
CIL_0005QL CIL_0005QL_0002 CGP 14:52261759-52296391

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0045921 IEA positive regulation of exocytosis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003940 rab2a-001 protein_coding Danio_rerio 0 390
ENST00000397762 RAB2B-001 protein_coding Homo_sapiens 0 1114
ENST00000417141 RAB2B-007 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000461909 RAB2B-006 processed_transcript Homo_sapiens 0 795
ENST00000475857 RAB2B-004 processed_transcript Homo_sapiens 0 392
ENST00000485996 RAB2B-005 processed_transcript Homo_sapiens 0 252
ENST00000622293 RAB2B-201 protein_coding Homo_sapiens 0 928

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