C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022960 Eif3e-201 ENSMUSG00000022336 10090 - 15:43250040-43282736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022960 28.818±4.51 8.671±0.76 69.007±4.36 47.995±11.51 22.172±2.89 11.925±1.65 17.653±1.17 17.339±2.49 35.248±28.67 19.176±3.27 59.361±6.40 31.147±37.18 74.007±36.67 32.875±12.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T1 CIL_0004T1_0003 CGP 15:43020811-43282736
CIL_0004T2 CIL_0004T2_0003 CGP 15:43250040-43527777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 ISS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IDA translation initiation factor activity
GO:0005634 IEA nucleus
GO:0005852 IDA eukaryotic translation initiation factor 3 complex
GO:0006413 IDA translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016020 IEA membrane
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044822 IEA poly(A) RNA binding
GO:0047485 IEA protein N-terminus binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220849 EIF3E-001 protein_coding Homo_sapiens 0 1831
ENST00000433978 EIF3EP1-001 processed_pseudogene Homo_sapiens 0 1480
ENST00000518100 EIF3E-006 nonsense_mediated_decay Homo_sapiens 0 475
ENST00000518345 EIF3E-007 protein_coding Homo_sapiens 0 398
ENST00000518442 EIF3E-003 retained_intron Homo_sapiens 0 647
ENST00000519030 EIF3E-002 protein_coding Homo_sapiens 0 1531
ENST00000519413 EIF3E-014 processed_transcript Homo_sapiens 0 226
ENST00000519517 EIF3E-012 processed_transcript Homo_sapiens 0 839
ENST00000519627 EIF3E-008 protein_coding Homo_sapiens 0 804
ENST00000521440 EIF3E-011 protein_coding Homo_sapiens 0 617
ENST00000521614 EIF3E-004 retained_intron Homo_sapiens 0 1683
ENST00000522352 EIF3E-015 protein_coding Homo_sapiens 0 390
ENST00000522445 EIF3E-009 nonsense_mediated_decay Homo_sapiens 0 977
ENST00000522887 EIF3E-005 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000523646 EIF3E-013 retained_intron Homo_sapiens 0 350
ENST00000523674 EIF3E-016 retained_intron Homo_sapiens 0 257
ENST00000613695 RP11-452N17.1-001 unprocessed_pseudogene Homo_sapiens 0 381

Loading