C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenylosuccinate lyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023043 Adsl-001 ENSMUSG00000022407 10090 + 15:80948490-80970947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverOvaryENSMUST00000023043
Transcript ID Adrenal Colon Liver Ovary
ENSMUST00000023043 1.900±0.04 1.288±0.00 0.954±0.00 1.618±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F2 CIL_0006F2_0002 CGP 15:80711319-80970947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0004018 ISA N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
GO:0005739 IDA mitochondrion
GO:0005829 IEA cytosol
GO:0006163 IEA purine nucleotide metabolic process
GO:0006167 ISA AMP biosynthetic process
GO:0006189 IEA 'de novo' IMP biosynthetic process
GO:0007584 IEA response to nutrient
GO:0008152 IEA metabolic process
GO:0009060 IEA aerobic respiration
GO:0009156 IEA ribonucleoside monophosphate biosynthetic process
GO:0014850 IEA response to muscle activity
GO:0042594 IEA response to starvation
GO:0044208 IEA 'de novo' AMP biosynthetic process
GO:0051262 IEA protein tetramerization
GO:0070626 IEA (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216194 ADSL-017 protein_coding Homo_sapiens 0 1243
ENST00000342312 ADSL-002 protein_coding Homo_sapiens 0 1415
ENST00000466863 ADSL-003 retained_intron Homo_sapiens 0 359
ENST00000477111 ADSL-005 retained_intron Homo_sapiens 0 359
ENST00000623063 ADSL-001 protein_coding Homo_sapiens 0 1659
ENST00000623287 ADSL-012 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000623632 ADSL-010 protein_coding Homo_sapiens 0 536
ENST00000623978 ADSL-011 protein_coding Homo_sapiens 0 732
ENST00000624474 ADSL-013 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000624503 ADSL-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000625194 ADSL-014 protein_coding Homo_sapiens 0 737

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