C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006F2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100354-ENSG00000239900 CGP 9606 22:40044817-40369367
GeneTranscriptPositionBiotype
ENSG00000100354 (TNRC6B)
trinucleotide repeat containing 6B 		ENST00000301923 (TNRC6B-201) 40044817-40335807 protein_coding
ENST00000335727 (TNRC6B-002) 40177942-40335808 protein_coding
ENST00000402203 (TNRC6B-001) 40045474-40323360 protein_coding
ENST00000441751 (TNRC6B-004) 40044817-40156182 protein_coding
ENST00000446273 (TNRC6B-003) 40265003-40321799 protein_coding
ENST00000454349 (TNRC6B-202) 40177925-40335807 protein_coding
ENST00000467658 (TNRC6B-007) 40300856-40301495 retained_intron
ENST00000489500 (TNRC6B-005) 40177925-40246362 retained_intron
ENST00000497559 (TNRC6B-006) 40276840-40300498 processed_transcript
ENSG00000228599 (RPL7P52)
ribosomal protein L7 pseudogene 52 		ENST00000449200 (RPL7P52-001) 40106325-40107066 processed_pseudogene
ENSG00000239900 (ADSL)
adenylosuccinate lyase 		ENST00000216194 (ADSL-017) 40346528-40366614 protein_coding
ENST00000342312 (ADSL-002) 40346503-40366996 protein_coding
ENST00000423176 (ADSL-009) 40364962-40368038 protein_coding
ENST00000466863 (ADSL-003) 40346518-40350323 retained_intron
ENST00000477111 (ADSL-005) 40346529-40359302 retained_intron
ENST00000480775 (ADSL-006) 40358968-40363053 nonsense_mediated_decay
ENST00000623063 (ADSL-001) 40346500-40369367 protein_coding
ENST00000623287 (ADSL-012) 40346530-40361577 nonsense_mediated_decay
ENST00000623387 (ADSL-015) 40364558-40366556 retained_intron
ENST00000623632 (ADSL-010) 40346500-40361313 protein_coding
ENST00000623978 (ADSL-011) 40346529-40361566 protein_coding
ENST00000624027 (ADSL-016) 40364962-40368105 protein_coding
ENST00000624474 (ADSL-013) 40346532-40360431 nonsense_mediated_decay
ENST00000624503 (ADSL-007) 40346518-40352055 nonsense_mediated_decay
ENST00000625194 (ADSL-014) 40354259-40366517 protein_coding
CIL_0006F2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047888-ENSMUSG00000022407 CGP 10090 15:80711319-80970947
GeneTranscriptPositionBiotype
ENSMUSG00000022407 (Adsl)
adenylosuccinate lyase 		ENSMUST00000023043 (Adsl-001) 80948490-80970947 protein_coding
ENSMUST00000163575 (Adsl-008) 80961213-80963844 retained_intron
ENSMUST00000164371 (Adsl-005) 80948542-80955888 retained_intron
ENSMUST00000164806 (Adsl-003) 80948548-80968748 protein_coding
ENSMUST00000166711 (Adsl-002) 80948512-80969119 nonsense_mediated_decay
ENSMUST00000168756 (Adsl-004) 80948548-80968748 protein_coding
ENSMUST00000169238 (Adsl-006) 80948537-80964036 nonsense_mediated_decay
ENSMUST00000170354 (Adsl-007) 80948777-80952288 protein_coding
ENSMUSG00000047888 (Tnrc6b)
trinucleotide repeat containing 6b 		ENSMUST00000067689 (Tnrc6b-201) 80711319-80941086 protein_coding
ENSMUSG00000058357 (Gm6612)
predicted gene 6612 		ENSMUST00000170777 (Gm6612-001) 80952505-80952899 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F2_0001ENSG00000100354ENST00000301923ENST00000335727ENST00000402203ENST00000441751ENST00000446273ENST00000454349ENST00000467658ENST00000489500ENST00000497559ENSG00000228599ENST00000449200ENSG00000239900ENST00000216194ENST00000342312ENST00000423176ENST00000466863ENST00000477111ENST00000480775ENST00000623063ENST00000623287ENST00000623387ENST00000623632ENST00000623978ENST00000624027ENST00000624474ENST00000624503ENST00000625194CIL_0006F2_0002ENSMUSG00000022407ENSMUST00000023043ENSMUST00000163575ENSMUST00000164371ENSMUST00000164806ENSMUST00000166711ENSMUST00000168756ENSMUST00000169238ENSMUST00000170354ENSMUSG00000047888ENSMUST00000067689ENSMUSG00000058357ENSMUST00000170777
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F2_0001ENSG00000100354ENST00000301923ENST00000335727ENST00000402203ENST00000446273ENST00000454349ENSG00000228599ENST00000449200ENSG00000239900ENST00000216194ENST00000342312ENST00000466863ENST00000623063ENST00000623978ENST00000625194CIL_0006F2_0002ENSMUSG00000022407ENSMUST00000023043ENSMUST00000164371ENSMUST00000164806ENSMUST00000166711ENSMUST00000168756ENSMUSG00000047888ENSMUST00000067689ENSMUSG00000058357ENSMUST00000170777
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100354 ENST00000301923 0.623±0.00 N/A N/A 0.936±0.00 N/A N/A N/A N/A N/A N/A 0.352±0.00 0.376±0.00 N/A N/A
ENST00000335727 0.647±0.00 N/A N/A 0.803±0.18 N/A 1.258±0.47 1.487±0.60 1.979±0.00 2.599±0.00 0.613±0.00 0.887±0.27 1.090±0.59 0.772±0.78 2.871±0.96
ENST00000402203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.03 8.381±0.00
ENST00000441751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446273 N/A N/A N/A N/A 2.315±0.00 N/A N/A N/A 3.083±0.00 N/A N/A N/A N/A 3.179±0.00
ENST00000454349 N/A N/A N/A 1.018±0.06 N/A N/A 0.703±0.20 N/A N/A N/A N/A 0.634±0.20 N/A N/A
ENST00000467658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228599 ENST00000449200 0.150±0.00 0.346±0.00 N/A 0.052±0.00 0.118±0.00 N/A 0.335±0.32 0.190±0.00 N/A 0.049±0.00 N/A 0.085±0.00 N/A 0.123±0.00
ENSG00000239900 ENST00000216194 16.383±0.00 18.919±0.00 N/A 12.318±3.23 11.705±5.59 11.212±2.01 6.914±2.89 13.779±8.12 9.330±0.84 N/A 49.453±16.79 30.555±21.33 28.669±0.00 28.718±1.03
ENST00000342312 N/A N/A N/A 7.398±0.00 4.981±0.00 N/A 4.504±0.00 N/A 6.697±0.00 5.185±0.00 18.019±0.00 7.235±0.00 N/A N/A
ENST00000423176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466863 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.354±0.00 N/A N/A N/A N/A
ENST00000477111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623063 N/A N/A N/A N/A N/A N/A 1.856±0.00 N/A N/A N/A 7.883±3.76 N/A N/A N/A
ENST00000623287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623978 N/A N/A N/A N/A N/A N/A N/A 9.696±0.00 N/A N/A N/A 94.960±0.00 50.986±0.00 N/A
ENST00000624027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000625194 N/A 19.975±0.00 N/A N/A N/A 15.712±0.00 9.793±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022407 ENSMUST00000023043 N/A 1.900±0.04 N/A N/A N/A 1.288±0.00 N/A N/A 0.954±0.00 N/A N/A 1.618±0.93 N/A N/A
ENSMUST00000163575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.175±0.00 45.547±0.00 N/A
ENSMUST00000164806 14.284±3.95 5.404±0.90 13.807±3.37 11.318±1.25 10.237±6.53 9.879±4.23 19.812±3.89 10.895±3.38 11.595±8.47 10.336±3.11 28.942±7.92 16.755±4.94 13.739±9.50 8.564±0.68
ENSMUST00000166711 8.642±1.78 8.115±1.59 12.345±1.84 8.385±1.09 8.457±2.27 6.560±1.18 9.885±1.17 7.161±2.17 7.578±5.45 5.902±0.88 19.839±8.13 12.103±3.86 12.869±6.83 6.735±1.85
ENSMUST00000168756 4.644±0.88 5.359±1.76 5.609±0.00 3.653±0.00 5.711±1.12 4.774±0.27 7.820±0.99 9.151±0.62 4.089±1.81 5.817±0.00 10.686±0.00 4.763±0.16 4.158±1.30 2.602±0.25
ENSMUST00000169238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047888 ENSMUST00000067689 3.057±1.36 4.367±1.64 1.708±0.51 5.674±3.05 5.067±2.08 4.322±0.67 2.215±0.94 3.252±1.19 2.774±1.51 4.207±1.60 2.400±1.05 5.715±2.12 1.210±0.59 2.167±1.01
ENSMUSG00000058357 ENSMUST00000170777 0.130±0.00 0.195±0.01 0.108±0.00 0.375±0.00 0.220±0.09 0.433±0.34 0.210±0.07 0.260±0.13 0.156±0.14 0.321±0.00 0.181±0.00 0.400±0.16 0.176±0.05 0.307±0.05

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