C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endonuclease, polyU-specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023105 Endou-201 ENSMUSG00000022468 10090 - 15:97711019-97721150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverOvaryTestisENSMUST00000023105
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Ovary Testis
ENSMUST00000023105 0.222±0.09 0.182±0.08 0.360±0.15 0.293±0.09 0.238±0.00 0.109±0.07 0.321±0.17 0.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YS CIL_0005YS_0002 CGP 15:97675105-97731405
CIL_0005YT CIL_0005YT_0002 CGP 15:97711019-97767972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0004521 ISS endoribonuclease activity
GO:0005044 IEA scavenger receptor activity
GO:0005576 IEA extracellular region
GO:0005737 ISS cytoplasm
GO:0006508 ISS proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0006955 IEA immune response
GO:0007565 ISS female pregnancy
GO:0008236 ISS serine-type peptidase activity
GO:0030247 IEA polysaccharide binding
GO:0046872 IEA metal ion binding
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229003 ENDOU-001 protein_coding Homo_sapiens 0 1011
ENST00000422538 ENDOU-002 protein_coding Homo_sapiens 0 1011
ENST00000545824 ENDOU-003 protein_coding Homo_sapiens 0 1007

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