C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endonuclease, polyU-specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000229003 ENDOU-001 ENSG00000111405 9606 - 12:47709734-47725567 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000229003
Transcript ID Placenta
ENST00000229003 17.735±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YS CIL_0005YS_0001 CGP 12:47661249-47725567
CIL_0005YT CIL_0005YT_0001 CGP 12:47709734-47771040

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IDA RNA binding
GO:0004521 IDA endoribonuclease activity
GO:0005044 IEA scavenger receptor activity
GO:0005576 TAS extracellular region
GO:0005615 TAS extracellular space
GO:0005737 TAS cytoplasm
GO:0005886 TAS plasma membrane
GO:0006508 IDA proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0006955 IEA immune response
GO:0007565 IEP female pregnancy
GO:0008083 NAS growth factor activity
GO:0008236 IDA serine-type peptidase activity
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0030145 TAS manganese ion binding
GO:0030247 IEA polysaccharide binding
GO:0090502 IDA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023105 Endou-201 protein_coding Mus_musculus 0 1011
ENSMUST00000100249 Endou-202 protein_coding Mus_musculus 0 1011

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