C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rogdi homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023191 Rogdi-201 ENSMUSG00000022540 10090 - 16:5008730-5013517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000023191
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000023191 5.298±2.78 12.309±0.00 15.560±1.93 15.023±8.82 18.931±10.94 9.387±7.97 49.453±30.44 20.059±5.09 14.451±4.70 6.418±5.16 11.603±0.86 43.937±24.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004V CIL_00004V_0002 CGP 16:5007288-5013517
CIL_0001G7 CIL_0001G7_0002 CGP 16:5008730-5049910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008284 IDA positive regulation of cell proliferation
GO:0030097 IDA hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322048 ROGDI-001 protein_coding Homo_sapiens 0 734
ENST00000585653 ROGDI-013 retained_intron Homo_sapiens 0 335
ENST00000585871 ROGDI-007 retained_intron Homo_sapiens 0 220
ENST00000586153 ROGDI-016 protein_coding Homo_sapiens 0 230
ENST00000586336 ROGDI-008 processed_transcript Homo_sapiens 0 638
ENST00000586504 ROGDI-009 protein_coding Homo_sapiens 0 473
ENST00000587377 ROGDI-003 nonsense_mediated_decay Homo_sapiens 0 664
ENST00000587843 ROGDI-002 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000588201 ROGDI-005 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000589543 ROGDI-011 retained_intron Homo_sapiens 0 579
ENST00000590198 ROGDI-012 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000591292 ROGDI-006 retained_intron Homo_sapiens 0 737
ENST00000591392 ROGDI-015 protein_coding Homo_sapiens 0 684
ENST00000592019 ROGDI-010 protein_coding Homo_sapiens 4e-28 128

Loading