C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rogdi homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587377 ROGDI-003 ENSG00000067836 9606 - 16:4796987-4802615 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587377
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587377 1.186±0.00 17.466±7.31 1.656±0.00 7.813±0.00 5.311±3.16 9.205±0.00 2.074±0.75 1.117±0.00 3.999±2.44 7.143±4.60 7.118±1.43 4.955±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004V CIL_00004V_0001 CGP 16:4788397-4802950
CIL_0001G7 CIL_0001G7_0001 CGP 16:4796968-4847342

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023191 Rogdi-201 protein_coding Mus_musculus 0 664
ENSMUST00000090453 Rogdi-202 protein_coding Mus_musculus 0 649

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