C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rogdi homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587843 ROGDI-002 ENSG00000067836 9606 - 16:4796969-4802633 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587843
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587843 1.929±0.00 2.384±0.00 24.973±15.56 1.986±0.00 5.659±0.00 3.822±2.99 3.508±0.00 5.549±0.00 4.320±3.40 2.258±0.00 3.644±1.02 5.694±0.26 4.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004V CIL_00004V_0001 CGP 16:4788397-4802950
CIL_0001G7 CIL_0001G7_0001 CGP 16:4796968-4847342

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023191 Rogdi-201 protein_coding Mus_musculus 0 734
ENSMUST00000090453 Rogdi-202 protein_coding Mus_musculus 0 435

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