C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thymidine phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023285 Tymp-201 ENSMUSG00000022615 10090 - 15:89371931-89377039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungOvaryENSMUST00000023285
Transcript ID Colon Liver Lung Ovary
ENSMUST00000023285 8.663±0.78 65.032±13.48 11.019±0.00 18.660±3.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026C CIL_00026C_0002 CGP 15:89351004-89372826
CIL_0000V1 CIL_0000V1_0003 CGP 15:89355719-89373818
CIL_00025U CIL_00025U_0002 CGP 15:89371639-89377039
CIL_0002WN CIL_0002WN_0002 CGP 15:89371931-89379254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004645 TAS phosphorylase activity
GO:0006206 IEA pyrimidine nucleobase metabolic process
GO:0006213 IEA pyrimidine nucleoside metabolic process
GO:0006935 TAS chemotaxis
GO:0009032 IEA thymidine phosphorylase activity
GO:0009887 TAS organ morphogenesis
GO:0016154 IEA pyrimidine-nucleoside phosphorylase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252785 SCO2-002 protein_coding Homo_sapiens 0 372
ENST00000395693 SCO2-001 protein_coding Homo_sapiens 0 372
ENST00000535425 SCO2-201 protein_coding Homo_sapiens 0 372
ENST00000543927 SCO2-202 protein_coding Homo_sapiens 0 372

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