C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100258-ENSG00000025770 CGP 9606 22:50502949-50523472
GeneTranscriptPositionBiotype
ENSG00000025770 (NCAPH2)
non-SMC condensin II complex, subunit H2 		ENST00000299821 (NCAPH2-009) 50508260-50523472 protein_coding
ENST00000395698 (NCAPH2-003) 50508243-50519752 protein_coding
ENST00000395701 (NCAPH2-006) 50508244-50523472 protein_coding
ENST00000418794 (NCAPH2-004) 50508259-50518058 nonsense_mediated_decay
ENST00000420993 (NCAPH2-001) 50508216-50523472 protein_coding
ENST00000518394 (NCAPH2-013) 50508245-50518276 nonsense_mediated_decay
ENST00000520297 (NCAPH2-014) 50519547-50522418 processed_transcript
ENST00000522048 (NCAPH2-015) 50520410-50522569 retained_intron
ENST00000522304 (NCAPH2-016) 50522525-50523471 protein_coding
ENST00000523045 (NCAPH2-012) 50508246-50521589 protein_coding
ENSG00000100258 (LMF2)
lipase maturation factor 2 		ENST00000216080 (LMF2-001) 50502951-50507684 protein_coding
ENST00000474879 (LMF2-002) 50502949-50507691 protein_coding
ENST00000504717 (LMF2-007) 50503261-50505257 retained_intron
ENST00000505981 (LMF2-005) 50505696-50507166 processed_transcript
ENST00000507607 (LMF2-004) 50506396-50507250 retained_intron
ENST00000514938 (LMF2-006) 50504834-50506220 retained_intron
CIL_00026C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022614-ENSMUSG00000008690 CGP 10090 15:89351004-89372826
GeneTranscriptPositionBiotype
ENSMUSG00000022614 (Lmf2)
lipase maturation factor 2 		ENSMUST00000023283 (Lmf2-201) 89351004-89355659 protein_coding
ENSMUSG00000022615 (Tymp)
thymidine phosphorylase 		ENSMUST00000023285 (Tymp-201) 89371931-89377039 protein_coding
ENSMUSG00000091780 (Sco2)
SCO cytochrome oxidase deficient homolog 2 (yeast) 		ENSMUST00000167643 (Sco2-201) 89371639-89373818 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026C_0001ENSG00000025770ENST00000299821ENST00000395698ENST00000395701ENST00000418794ENST00000420993ENST00000518394ENST00000520297ENST00000522048ENST00000522304ENST00000523045ENSG00000100258ENST00000216080ENST00000474879ENST00000504717ENST00000505981ENST00000507607ENST00000514938CIL_00026C_0002ENSMUSG00000022614ENSMUST00000023283ENSMUSG00000022615ENSMUST00000023285ENSMUSG00000091780ENSMUST00000167643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026C_0001ENSG00000025770ENST00000299821ENST00000395698ENST00000395701ENST00000420993ENST00000518394ENST00000520297ENST00000522304ENST00000523045ENSG00000100258ENST00000216080ENST00000474879ENST00000504717ENST00000505981CIL_00026C_0002ENSMUSG00000022614ENSMUST00000023283ENSMUSG00000022615ENSMUST00000023285ENSMUSG00000091780ENSMUST00000167643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000025770 ENST00000299821 3.626±0.00 6.882±0.00 N/A N/A N/A N/A 0.417±0.00 6.537±5.53 1.227±0.00 3.809±0.00 N/A 5.892±0.00 5.004±0.00 19.565±0.00
ENST00000395698 N/A N/A 0.607±0.00 N/A N/A N/A N/A N/A N/A 2.906±0.00 N/A N/A N/A N/A
ENST00000395701 N/A N/A N/A N/A 3.454±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420993 7.358±0.00 11.798±0.00 N/A 5.703±4.66 10.197±0.00 5.542±4.59 6.252±0.00 0.432±0.00 2.923±0.00 N/A 10.933±0.00 20.935±6.41 19.963±3.81 25.158±1.35
ENST00000518394 N/A N/A N/A N/A N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520297 N/A N/A 0.948±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 17.833±0.00 15.496±0.00 40.396±0.00
ENST00000522048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522304 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.888±0.00 N/A 17.652±0.00 N/A N/A
ENST00000523045 N/A N/A N/A 8.779±0.00 N/A N/A 4.023±0.00 N/A N/A 5.518±0.00 3.067±2.51 N/A N/A N/A
ENSG00000100258 ENST00000216080 N/A N/A N/A 1.186±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474879 21.413±0.00 12.167±0.00 2.032±0.00 3.620±0.96 12.550±11.67 7.299±5.47 4.726±4.29 13.657±10.34 8.922±6.84 15.350±0.00 6.562±5.43 20.798±16.21 29.080±6.88 9.965±7.37
ENST00000504717 13.681±0.00 19.614±0.00 N/A 7.339±0.00 20.002±0.00 9.825±0.00 N/A N/A N/A N/A N/A 12.170±2.67 N/A 9.568±4.83
ENST00000505981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.901±0.00 N/A N/A
ENST00000507607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022614 ENSMUST00000023283 17.668±3.30 20.386±2.90 10.357±3.22 7.334±3.79 14.592±5.28 15.344±1.45 7.021±2.59 13.845±2.50 8.999±2.92 30.527±0.64 3.580±0.46 19.147±6.34 18.020±7.51 13.671±5.85
ENSMUSG00000022615 ENSMUST00000023285 N/A N/A N/A N/A N/A 8.663±0.78 N/A N/A 65.032±13.48 11.019±0.00 N/A 18.660±3.16 N/A N/A
ENSMUSG00000091780 ENSMUST00000167643 27.488±4.30 26.473±7.67 23.521±3.16 27.096±4.64 21.363±6.61 26.180±2.84 25.533±4.26 34.387±2.91 77.412±52.06 34.447±2.25 8.932±0.91 45.162±16.76 25.448±3.39 33.869±4.52

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