C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO/sentrin specific peptidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023561 Senp2-201 ENSMUSG00000022855 10090 + 16:22009484-22049269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023561 4.811±1.63 7.256±3.16 12.532±1.31 12.546±3.91 4.930±2.43 3.384±1.64 2.116±0.25 3.828±0.86 7.205±4.93 6.169±0.32 5.881±0.41 5.374±2.52 17.090±6.12 19.295±2.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0006RE CIL_0006RE_0002 CGP 16:21953826-22049269
CIL_0006RH CIL_0006RH_0002 CGP 16:22009484-22163299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005643 ISS nuclear pore
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IEA proteolysis
GO:0007507 IMP heart development
GO:0009950 IEA dorsal/ventral axis specification
GO:0015031 IEA protein transport
GO:0016055 IEA Wnt signaling pathway
GO:0016604 IDA nuclear body
GO:0016605 IDA PML body
GO:0016926 IDA protein desumoylation
GO:0016929 ISS SUMO-specific protease activity
GO:0019904 IEA protein domain specific binding
GO:0031410 IDA cytoplasmic vesicle
GO:0032091 IEA negative regulation of protein binding
GO:0032875 IMP regulation of DNA endoreduplication
GO:0035562 IMP negative regulation of chromatin binding
GO:0043518 IDA negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0051028 IEA mRNA transport
GO:0051246 IEA regulation of protein metabolic process
GO:0060707 IMP trophoblast giant cell differentiation
GO:0060711 IMP labyrinthine layer development
GO:0060712 IMP spongiotrophoblast layer development
GO:1901797 IDA negative regulation of signal transduction by p53 class mediator
GO:2000045 IMP regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296257 SENP2-001 protein_coding Homo_sapiens 0 2532
ENST00000413407 SENP2-002 nonsense_mediated_decay Homo_sapiens 0 1986
ENST00000430355 SENP2-004 protein_coding Homo_sapiens 0 736
ENST00000439684 SENP2-007 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000444509 SENP2-012 protein_coding Homo_sapiens 0 545
ENST00000453532 SENP2-006 nonsense_mediated_decay Homo_sapiens 0 472
ENST00000458551 SENP2-008 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000459883 SENP2-010 retained_intron Homo_sapiens 0 263
ENST00000465201 SENP2-005 processed_transcript Homo_sapiens 0 675
ENST00000473760 SENP2-009 retained_intron Homo_sapiens 0 680
ENST00000478001 SENP2-011 retained_intron Homo_sapiens 0 455
ENST00000483005 SENP2-013 retained_intron Homo_sapiens 0 601
ENST00000615670 SGK223-001 protein_coding Homo_sapiens 0.0003 53
ENST00000622241 SGK223-201 protein_coding Homo_sapiens 0.0003 53

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