C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO1/sentrin/SMT3 specific peptidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413407 SENP2-002 ENSG00000163904 9606 + 3:185586295-185630405 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413407
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413407 7.415±0.00 2.643±0.00 3.620±0.90 4.780±0.00 2.284±1.28 2.193±1.67 2.675±0.41 1.745±0.39 2.425±0.00 2.693±0.00 10.529±10.62 4.466±1.42 30.917±13.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0001 VISTA 3:185444884-186046681
CIL_0006RE CIL_0006RE_0001 CGP 3:185506262-185633551
CIL_0006RH CIL_0006RH_0001 CGP 3:185582496-185825056

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023561 Senp2-201 protein_coding Mus_musculus 0 1986
ENSMUST00000119588 Gm5402-001 processed_pseudogene Mus_musculus 0 1201

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