C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163904-ENSG00000073792 CGP 9606 3:185582496-185825056
GeneTranscriptPositionBiotype
ENSG00000073792 (IGF2BP2)
insulin-like growth factor 2 mRNA binding protein 2 		ENST00000346192 (IGF2BP2-002) 185643975-185825024 protein_coding
ENST00000382199 (IGF2BP2-001) 185643739-185825056 protein_coding
ENST00000421047 (IGF2BP2-201) 185645501-185821131 protein_coding
ENST00000457616 (IGF2BP2-008) 185643975-185825012 protein_coding
ENST00000461957 (IGF2BP2-005) 185689455-185823271 processed_transcript
ENST00000464166 (IGF2BP2-003) 185646880-185649523 processed_transcript
ENST00000466214 (IGF2BP2-009) 185814055-185821103 processed_transcript
ENST00000466476 (IGF2BP2-006) 185696415-185824892 processed_transcript
ENST00000493302 (IGF2BP2-007) 185689555-185821131 processed_transcript
ENST00000494906 (IGF2BP2-010) 185649403-185689238 processed_transcript
ENST00000496495 (IGF2BP2-004) 185675016-185675846 processed_transcript
ENSG00000163904 (SENP2)
SUMO1/sentrin/SMT3 specific peptidase 2 		ENST00000296257 (SENP2-001) 185586174-185633551 protein_coding
ENST00000413407 (SENP2-002) 185586295-185630405 nonsense_mediated_decay
ENST00000430355 (SENP2-004) 185582496-185609285 protein_coding
ENST00000439684 (SENP2-007) 185586295-185606491 nonsense_mediated_decay
ENST00000444509 (SENP2-012) 185613355-185626307 protein_coding
ENST00000453532 (SENP2-006) 185586241-185609318 nonsense_mediated_decay
ENST00000458551 (SENP2-008) 185586298-185600825 nonsense_mediated_decay
ENST00000459883 (SENP2-010) 185609003-185613374 retained_intron
ENST00000465201 (SENP2-005) 185582784-185606490 processed_transcript
ENST00000473760 (SENP2-009) 185598965-185613511 retained_intron
ENST00000476011 (SENP2-014) 185612222-185613644 retained_intron
ENST00000478001 (SENP2-011) 185611528-185617509 retained_intron
ENST00000483005 (SENP2-013) 185614503-185619519 retained_intron
ENSG00000163915 (C3orf65)
IGF2BP2 antisense RNA 1 		ENST00000296270 (C3orf65-001) 185713292-185718167 antisense
ENST00000456447 (C3orf65-002) 185713252-185729787 antisense
ENST00000465364 (C3orf65-005) 185728244-185728587 antisense
ENST00000470754 (C3orf65-004) 185712528-185716892 antisense
ENST00000496717 (C3orf65-003) 185722464-185729787 antisense
ENSG00000236489 (RP11-537I16.2)
 ENST00000455173 (RP11-537I16.2-001) 185606575-185606873 processed_pseudogene
CIL_0006RH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022855-ENSMUSG00000033581 CGP 10090 16:22009484-22163299
GeneTranscriptPositionBiotype
ENSMUSG00000022855 (Senp2)
SUMO/sentrin specific peptidase 2 		ENSMUST00000023561 (Senp2-201) 22009484-22049269 protein_coding
ENSMUSG00000033581 (Igf2bp2)
insulin-like growth factor 2 mRNA binding protein 2 		ENSMUST00000100052 (Igf2bp2-001) 22059009-22163299 protein_coding
ENSMUST00000115379 (Igf2bp2-004) 22059460-22161450 protein_coding
ENSMUST00000124318 (Igf2bp2-007) 22061366-22063697 retained_intron
ENSMUST00000125926 (Igf2bp2-005) 22151464-22162992 processed_transcript
ENSMUST00000127696 (Igf2bp2-002) 22160881-22162975 retained_intron
ENSMUST00000129913 (Igf2bp2-003) 22059055-22163019 retained_intron
ENSMUST00000134188 (Igf2bp2-009) 22059074-22089118 retained_intron
ENSMUST00000146885 (Igf2bp2-006) 22076018-22079118 retained_intron
ENSMUST00000151087 (Igf2bp2-008) 22083942-22137209 processed_transcript
ENSMUSG00000068487 (Gm4943)
predicted pseudogene 4943 		ENSMUST00000132879 (Gm4943-001) 22053510-22053933 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RH_0001ENSG00000073792ENST00000346192ENST00000382199ENST00000421047ENST00000457616ENST00000461957ENST00000464166ENST00000466214ENST00000466476ENST00000493302ENST00000494906ENST00000496495ENSG00000163904ENST00000296257ENST00000413407ENST00000430355ENST00000439684ENST00000444509ENST00000453532ENST00000458551ENST00000459883ENST00000465201ENST00000473760ENST00000476011ENST00000478001ENST00000483005ENSG00000163915ENST00000296270ENST00000456447ENST00000465364ENST00000470754ENST00000496717ENSG00000236489ENST00000455173CIL_0006RH_0002ENSMUSG00000022855ENSMUST00000023561ENSMUSG00000033581ENSMUST00000100052ENSMUST00000115379ENSMUST00000124318ENSMUST00000125926ENSMUST00000127696ENSMUST00000129913ENSMUST00000134188ENSMUST00000146885ENSMUST00000151087ENSMUSG00000068487ENSMUST00000132879
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RH_0001ENSG00000073792ENST00000346192ENST00000382199ENST00000421047ENST00000457616ENST00000494906ENST00000496495ENSG00000163904ENST00000296257ENST00000413407ENST00000439684ENST00000473760ENST00000478001ENSG00000163915ENST00000296270ENST00000456447ENST00000470754ENST00000496717ENSG00000236489ENST00000455173CIL_0006RH_0002ENSMUSG00000022855ENSMUST00000023561ENSMUSG00000033581ENSMUST00000100052ENSMUST00000115379ENSMUST00000127696ENSMUST00000129913ENSMUST00000134188ENSMUSG00000068487ENSMUST00000132879
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073792 ENST00000346192 2.086±0.00 N/A 1.483±0.00 N/A N/A 0.585±0.00 0.937±0.66 0.151±0.00 0.208±0.00 N/A N/A 4.875±3.85 2.288±0.19 1.885±0.00
ENST00000382199 2.515±0.00 0.358±0.00 N/A N/A 0.928±0.00 1.537±0.38 3.266±0.00 1.072±0.82 0.205±0.00 3.604±1.62 N/A 27.017±28.08 5.311±0.72 0.707±0.00
ENST00000421047 N/A N/A N/A N/A 1.641±0.00 2.270±0.00 0.430±0.00 N/A 0.218±0.00 N/A 0.091±0.00 40.372±25.29 9.144±0.00 3.690±0.00
ENST00000457616 0.796±0.00 0.369±0.00 N/A 0.043±0.00 0.812±0.00 N/A N/A N/A 0.094±0.00 N/A N/A 100.874±0.00 7.456±0.00 4.020±0.00
ENST00000461957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.172±0.00
ENST00000496495 N/A N/A N/A 0.757±0.00 N/A N/A N/A 1.531±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000163904 ENST00000296257 4.740±0.00 2.384±0.00 0.661±0.00 4.288±1.63 4.117±0.00 2.001±0.00 1.731±1.35 2.973±0.00 1.253±0.48 1.105±0.45 2.235±0.69 11.651±8.26 4.644±1.90 13.113±3.97
ENST00000413407 7.415±0.00 2.643±0.00 N/A 3.620±0.90 4.780±0.00 2.284±1.28 2.193±1.67 2.675±0.41 1.745±0.39 2.425±0.00 2.693±0.00 10.529±10.62 4.466±1.42 30.917±13.87
ENST00000430355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.154±0.00 N/A N/A N/A
ENST00000444509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473760 N/A N/A N/A 3.776±0.00 N/A N/A N/A N/A 3.214±0.00 N/A N/A N/A N/A N/A
ENST00000476011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478001 N/A N/A 5.553±0.00 N/A 4.868±0.00 N/A N/A N/A 8.045±0.00 N/A N/A N/A N/A N/A
ENST00000483005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163915 ENST00000296270 0.022±0.00 N/A N/A N/A N/A 0.078±0.00 0.014±0.00 0.095±0.00 0.178±0.00 N/A N/A 0.028±0.01 N/A 0.516±0.00
ENST00000456447 N/A 0.016±0.00 N/A 0.037±0.00 0.009±0.00 0.073±0.00 0.014±0.00 N/A 0.039±0.00 0.023±0.00 N/A N/A 0.030±0.00 0.048±0.00
ENST00000465364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470754 N/A N/A N/A N/A 0.055±0.00 N/A 0.228±0.00 N/A N/A 0.326±0.00 N/A N/A 0.025±0.00 N/A
ENST00000496717 N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236489 ENST00000455173 0.297±0.00 0.564±0.00 3.363±0.00 0.718±0.34 3.576±0.00 7.898±0.00 N/A 3.090±2.93 1.767±1.31 4.574±4.53 1.311±0.00 4.811±5.40 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022855 ENSMUST00000023561 4.811±1.63 7.256±3.16 12.532±1.31 12.546±3.91 4.930±2.43 3.384±1.64 2.116±0.25 3.828±0.86 7.205±4.93 6.169±0.32 5.881±0.41 5.374±2.52 17.090±6.12 19.295±2.37
ENSMUSG00000033581 ENSMUST00000100052 1.141±0.74 0.584±0.14 0.530±0.09 1.696±0.20 0.392±0.15 3.745±0.84 0.282±0.10 0.702±0.29 0.896±0.37 1.307±0.13 0.216±0.01 1.026±0.40 6.203±2.09 0.132±0.08
ENSMUST00000115379 0.616±0.46 1.270±0.00 0.238±0.00 1.669±0.65 0.253±0.09 1.577±0.55 0.417±0.15 0.544±0.11 0.679±0.63 0.754±0.25 0.502±0.00 1.360±0.69 16.203±14.04 0.082±0.04
ENSMUST00000124318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127696 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A
ENSMUST00000129913 0.051±0.00 0.152±0.00 0.135±0.03 0.927±0.17 N/A 0.559±0.00 0.102±0.01 0.133±0.00 0.081±0.00 N/A 0.059±0.00 0.367±0.11 N/A 0.028±0.00
ENSMUST00000134188 N/A 0.802±0.36 0.391±0.17 0.780±0.63 0.086±0.00 2.673±0.00 N/A 0.308±0.00 0.910±0.74 0.665±0.17 0.197±0.09 1.612±0.67 14.086±7.79 0.222±0.10
ENSMUST00000146885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068487 ENSMUST00000132879 0.329±0.10 0.656±0.36 0.047±0.02 0.175±0.00 0.402±0.22 0.320±0.00 0.246±0.00 N/A 0.058±0.03 0.441±0.20 N/A 0.457±0.18 0.131±0.00 5.894±1.11

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