C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Down syndrome critical region gene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023615 Dscr3-001 ENSMUSG00000022898 10090 - 16:94497783-94526830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023615 23.510±1.53 14.523±1.59 19.714±0.47 13.072±10.10 21.847±6.75 12.065±0.76 12.325±0.39 14.402±2.02 9.993±2.43 17.036±2.58 3.469±1.16 16.149±3.14 28.070±9.63 4.663±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D0 CIL_0001D0_0003 CGP 16:94370618-94526830
CIL_0001CZ CIL_0001CZ_0003 CGP 16:94497783-94695517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309117 DSCR3-001 protein_coding Homo_sapiens 0 948
ENST00000398998 DSCR3-005 protein_coding Homo_sapiens 0 651
ENST00000399000 DSCR3-002 processed_transcript Homo_sapiens 0 525
ENST00000399001 DSCR3-006 protein_coding Homo_sapiens 0 427
ENST00000475009 DSCR3-007 retained_intron Homo_sapiens 0 422
ENST00000476950 DSCR3-011 protein_coding Homo_sapiens 0 427
ENST00000480452 DSCR3-012 processed_transcript Homo_sapiens 0 508
ENST00000488368 DSCR3-003 processed_transcript Homo_sapiens 0 835
ENST00000492514 DSCR3-008 processed_transcript Homo_sapiens 3e-18 95
ENST00000497493 DSCR3-004 retained_intron Homo_sapiens 0 267
ENST00000498789 DSCR3-009 processed_transcript Homo_sapiens 6e-25 119

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