C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Down syndrome critical region gene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309117 DSCR3-001 ENSG00000157538 9606 - 21:37223420-37267532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309117 9.335±0.00 7.726±0.00 3.649±0.00 4.086±2.68 8.859±0.00 4.842±2.11 6.720±4.82 9.174±6.73 6.051±1.98 4.244±3.12 7.940±6.75 9.406±3.89 12.464±0.94 4.932±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D0 CIL_0001D0_0002 CGP 21:37073226-37267919
CIL_0001CZ CIL_0001CZ_0002 CGP 21:37223420-37517450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023615 Dscr3-001 protein_coding Mus_musculus 0 948
ENSMUST00000127449 Dscr3-002 retained_intron Mus_musculus 0 604
ENSMUST00000133944 Dscr3-003 retained_intron Mus_musculus 0 422
ENSMUST00000142988 Dscr3-004 retained_intron Mus_musculus 0 283
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.000001 60

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