C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterol O-acyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023806 Soat2-001 ENSMUSG00000023045 10090 + 15:102150526-102163474 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023806 0.224±0.04 0.468±0.09 0.491±0.00 0.068±0.03 0.201±0.03 0.400±0.25 0.057±0.00 0.313±0.15 27.838±7.29 0.352±0.05 0.053±0.02 0.900±0.48 14.566±12.98 0.060±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TD CIL_0006TD_0002 CGP 15:102144362-102163474
CIL_0006TC CIL_0006TC_0002 CGP 15:102150526-102189043

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0004772 IDA sterol O-acyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005903 IEA brush border
GO:0008203 IDA cholesterol metabolic process
GO:0015485 IEA cholesterol binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0033344 IEA cholesterol efflux
GO:0034379 IEA very-low-density lipoprotein particle assembly
GO:0034435 IEA cholesterol esterification
GO:0034736 IEA cholesterol O-acyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301466 SOAT2-001 protein_coding Homo_sapiens 0 1465
ENST00000542365 SOAT2-002 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000551896 SOAT2-003 protein_coding Homo_sapiens 0 279

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