C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006TC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167780-ENSG00000139631 CGP 9606 12:53103518-53180909
GeneTranscriptPositionBiotype
ENSG00000139631 (CSAD)
cysteine sulfinic acid decarboxylase 		ENST00000267085 (CSAD-004) 53157663-53180596 protein_coding
ENST00000379843 (CSAD-201) 53157689-53173775 protein_coding
ENST00000379846 (CSAD-002) 53157694-53180596 protein_coding
ENST00000379850 (CSAD-003) 53157690-53180596 protein_coding
ENST00000424845 (CSAD-010) 53170071-53173790 nonsense_mediated_decay
ENST00000424990 (CSAD-005) 53171895-53180598 protein_coding
ENST00000437073 (CSAD-009) 53171404-53180646 protein_coding
ENST00000444623 (CSAD-017) 53158139-53180909 protein_coding
ENST00000453446 (CSAD-019) 53158511-53180646 protein_coding
ENST00000454442 (CSAD-008) 53170071-53172371 processed_transcript
ENST00000461392 (CSAD-006) 53173269-53173944 retained_intron
ENST00000472908 (CSAD-016) 53164622-53170653 retained_intron
ENST00000475890 (CSAD-001) 53157689-53173770 nonsense_mediated_decay
ENST00000483632 (CSAD-011) 53161322-53173374 nonsense_mediated_decay
ENST00000485004 (CSAD-013) 53160291-53170890 retained_intron
ENST00000490589 (CSAD-015) 53160277-53170376 retained_intron
ENST00000490923 (CSAD-014) 53159887-53170712 retained_intron
ENST00000491654 (CSAD-012) 53171665-53173492 processed_transcript
ENST00000498635 (CSAD-007) 53171946-53173919 protein_coding
ENST00000548698 (CSAD-020) 53161164-53173770 protein_coding
ENSG00000139651 (ZNF740)
zinc finger protein 740 		ENST00000416904 (ZNF740-002) 53180700-53195141 protein_coding
ENST00000549739 (ZNF740-003) 53185385-53186794 retained_intron
ENST00000551514 (ZNF740-004) 53187607-53188756 processed_transcript
ENST00000552593 (ZNF740-001) 53180704-53186031 retained_intron
ENSG00000167780 (SOAT2)
sterol O-acyltransferase 2 		ENST00000301466 (SOAT2-001) 53103518-53124538 protein_coding
ENST00000542365 (SOAT2-002) 53103531-53124350 nonsense_mediated_decay
ENST00000551896 (SOAT2-003) 53103518-53115516 protein_coding
ENSG00000257790 (RP11-1136G11.6)
 ENST00000550578 (RP11-1136G11.6-001) 53153272-53154484 processed_pseudogene
ENSG00000257808 (RP11-1136G11.8)
 ENST00000550908 (RP11-1136G11.8-001) 53159586-53161000 lincRNA
ENSG00000258016 (HIGD1AP1)
HIG1 hypoxia inducible domain family, member 1A pseudogene 1 		ENST00000550979 (HIGD1AP1-001) 53142053-53142327 processed_pseudogene
ENSG00000258074 (VTI1BP3)
vesicle transport through interaction with t-SNAREs 1B pseudogene 3 		ENST00000550220 (VTI1BP3-001) 53131350-53131985 processed_pseudogene
CIL_0006TC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023045-ENSMUSG00000023044 CGP 10090 15:102150526-102189043
GeneTranscriptPositionBiotype
ENSMUSG00000023044 (Csad)
cysteine sulfinic acid decarboxylase 		ENSMUST00000023805 (Csad-201) 102176998-102189043 protein_coding
ENSMUSG00000023045 (Soat2)
sterol O-acyltransferase 2 		ENSMUST00000023806 (Soat2-001) 102150526-102163474 protein_coding
ENSMUST00000160465 (Soat2-002) 102151116-102163132 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TC_0001ENSG00000139631ENST00000267085ENST00000379843ENST00000379846ENST00000379850ENST00000424845ENST00000424990ENST00000437073ENST00000444623ENST00000453446ENST00000454442ENST00000461392ENST00000472908ENST00000475890ENST00000483632ENST00000485004ENST00000490589ENST00000490923ENST00000491654ENST00000498635ENST00000548698ENSG00000139651ENST00000416904ENST00000549739ENST00000551514ENST00000552593ENSG00000167780ENST00000301466ENST00000542365ENST00000551896ENSG00000257790ENST00000550578ENSG00000257808ENST00000550908ENSG00000258016ENST00000550979ENSG00000258074ENST00000550220CIL_0006TC_0002ENSMUSG00000023044ENSMUST00000023805ENSMUSG00000023045ENSMUST00000023806ENSMUST00000160465
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TC_0001ENSG00000139631ENST00000267085ENST00000379846ENST00000379850ENST00000444623ENST00000453446ENST00000472908ENSG00000139651ENST00000416904ENSG00000167780ENST00000301466ENST00000542365ENST00000551896ENSG00000257790ENST00000550578ENSG00000257808ENST00000550908ENSG00000258016ENST00000550979ENSG00000258074ENST00000550220CIL_0006TC_0002ENSMUSG00000023044ENSMUST00000023805ENSMUSG00000023045ENSMUST00000023806ENSMUST00000160465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139631 ENST00000267085 N/A N/A N/A 3.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.659±0.00
ENST00000379843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379846 N/A N/A N/A N/A N/A N/A N/A N/A 3.574±0.00 N/A N/A N/A N/A N/A
ENST00000379850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.753±0.00 N/A
ENST00000424845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444623 N/A N/A N/A N/A N/A N/A N/A N/A 4.733±0.00 N/A N/A N/A N/A 6.594±0.00
ENST00000453446 N/A N/A N/A N/A N/A N/A N/A N/A 1.882±0.00 N/A N/A N/A N/A N/A
ENST00000454442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.461±0.00 N/A N/A N/A
ENST00000475890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139651 ENST00000416904 3.776±0.00 3.810±0.00 0.492±0.00 1.477±0.98 2.311±1.03 2.203±1.65 1.228±0.96 3.064±2.51 1.147±0.30 1.612±0.68 1.513±0.00 3.652±1.97 2.171±0.26 2.094±0.39
ENST00000549739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167780 ENST00000301466 N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A 0.118±0.00 N/A 0.080±0.02
ENST00000542365 0.099±0.00 0.043±0.00 0.134±0.00 0.016±0.00 0.118±0.00 0.039±0.00 N/A 0.099±0.00 N/A 0.013±0.00 N/A 0.781±0.00 0.094±0.04 0.144±0.00
ENST00000551896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00
ENSG00000257790 ENST00000550578 0.120±0.00 0.077±0.00 N/A 0.068±0.00 0.132±0.00 0.061±0.00 0.057±0.00 0.340±0.00 0.147±0.00 0.182±0.00 0.153±0.00 0.025±0.00 0.047±0.00 0.128±0.00
ENSG00000257808 ENST00000550908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.380±0.00
ENSG00000258016 ENST00000550979 N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A
ENSG00000258074 ENST00000550220 N/A N/A N/A N/A 0.026±0.00 N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023044 ENSMUST00000023805 28.286±11.91 22.597±10.47 19.782±9.28 10.694±1.92 30.721±6.87 9.704±3.46 3.498±0.53 43.246±15.37 39.600±23.11 12.647±1.44 1.544±0.84 17.606±6.91 6.622±2.82 2.756±1.20
ENSMUSG00000023045 ENSMUST00000023806 0.224±0.04 0.468±0.09 0.491±0.00 0.068±0.03 0.201±0.03 0.400±0.25 0.057±0.00 0.313±0.15 27.838±7.29 0.352±0.05 0.053±0.02 0.900±0.48 14.566±12.98 0.060±0.02
ENSMUST00000160465 N/A N/A N/A N/A 0.199±0.06 0.227±0.05 0.050±0.02 0.149±0.00 N/A N/A 0.049±0.00 N/A 0.519±0.00 0.015±0.00

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