C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358935 MARCH5-001 ENSG00000198060 9606 + 10:92291163-92353964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358935 5.500±0.00 5.847±0.00 0.715±0.00 4.333±2.59 6.101±0.00 2.205±1.43 2.554±2.08 3.272±2.88 3.553±0.00 3.067±0.00 2.554±1.53 6.256±2.10 3.901±0.88 6.533±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018Q CIL_00018Q_0001 CGP 10:92046692-92353964
CIL_00018P CIL_00018P_0001 CGP 10:92291163-92574076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0004842 IMP ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005741 IDA mitochondrial outer membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0051020 IPI GTPase binding
GO:0051865 IDA protein autoubiquitination
GO:0070585 IMP protein localization to mitochondrion
GO:0090140 IMP regulation of mitochondrial fission
GO:0090141 IMP positive regulation of mitochondrial fission
GO:0090344 IMP negative regulation of cell aging

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024078 March5-001 protein_coding Mus_musculus 0 1914
ENSMUST00000112391 March5-003 protein_coding Mus_musculus 0 1306
ENSMUST00000186995 RP23-14N2.2-001 processed_pseudogene Mus_musculus 0 1105
ENSMUST00000148105 March5-002 retained_intron Mus_musculus 0 791
ENSMUST00000128530 March5-004 protein_coding Mus_musculus 0 664

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