C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 2-oxoglutarate and iron-dependent oxygenase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024470 Ogfod2-001 ENSMUSG00000023707 10090 + 5:124112297-124115483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024470
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024470 12.706±2.61 30.388±2.13 10.076±1.18 12.482±5.33 13.909±2.62 19.325±2.20 6.171±0.45 17.600±2.14 11.192±4.93 10.367±1.36 4.301±0.93 15.668±3.87 9.503±2.40 15.489±4.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002PC CIL_0002PC_0002 CGP 5:124061530-124115483
CIL_0002P6 CIL_0002P6_0002 CGP 5:124112297-124118196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418 IEA L-ascorbic acid binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228922 OGFOD2-006 protein_coding Homo_sapiens 0 1003
ENST00000397389 OGFOD2-001 protein_coding Homo_sapiens 0 824
ENST00000406539 OGFOD2-014 retained_intron Homo_sapiens 0 822
ENST00000454694 OGFOD2-008 protein_coding Homo_sapiens 0 869
ENST00000536150 OGFOD2-009 protein_coding Homo_sapiens 0 824
ENST00000536439 OGFOD2-020 protein_coding Homo_sapiens 0 571
ENST00000538628 OGFOD2-011 protein_coding Homo_sapiens 0 651
ENST00000538755 OGFOD2-007 protein_coding Homo_sapiens 0 651
ENST00000540324 OGFOD2-002 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000542678 ABCB9-001 protein_coding Homo_sapiens 2e-36 159
ENST00000545056 OGFOD2-004 protein_coding Homo_sapiens 0 571
ENST00000545317 OGFOD2-003 protein_coding Homo_sapiens 0 651
ENST00000545396 OGFOD2-013 retained_intron Homo_sapiens 0 416
ENST00000545612 OGFOD2-010 protein_coding Homo_sapiens 0 651

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