C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 kinase, polypeptide 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024575 Rps6ka2-201 ENSMUSG00000023809 10090 + 17:7170115-7303313 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024575 3.900±1.04 6.180±1.64 2.371±0.04 10.605±1.83 2.674±0.85 2.368±1.02 6.923±4.71 2.083±0.95 0.813±0.42 10.232±1.66 31.417±0.00 21.169±3.62 5.910±2.13 4.676±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094V CIL_00094V_0002 VISTA 17:6968493-7569968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0001556 IDA oocyte maturation
GO:0002035 IDA brain renin-angiotensin system
GO:0004672 IDA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004711 IDA ribosomal protein S6 kinase activity
GO:0004712 ISO protein serine/threonine/tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0006468 IDA protein phosphorylation
GO:0007507 IDA heart development
GO:0008285 ISS negative regulation of cell proliferation
GO:0010628 IDA positive regulation of gene expression
GO:0010659 IDA cardiac muscle cell apoptotic process
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0031965 IEA nuclear membrane
GO:0035556 IEA intracellular signal transduction
GO:0043065 ISS positive regulation of apoptotic process
GO:0045786 ISS negative regulation of cell cycle
GO:0045835 IDA negative regulation of meiosis
GO:0060047 IDA heart contraction
GO:0070613 IDA regulation of protein processing
GO:0071322 IDA cellular response to carbohydrate stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265678 RPS6KA2-001 protein_coding Homo_sapiens 0 2684
ENST00000366865 RPS6KA2-002 processed_transcript Homo_sapiens 0 750
ENST00000366866 RPS6KA1-016 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000374163 RPS6KA1-002 nonsense_mediated_decay Homo_sapiens 0 944
ENST00000374166 RPS6KA1-010 protein_coding Homo_sapiens 0 688
ENST00000374168 RPS6KA1-001 protein_coding Homo_sapiens 0 1168
ENST00000405189 RPS6KA2-007 protein_coding Homo_sapiens 0 2433
ENST00000474934 RPS6KA1-004 retained_intron Homo_sapiens 0 226
ENST00000481261 RPS6KA2-006 protein_coding Homo_sapiens 0 2433
ENST00000491836 RPS6KA2-004 processed_transcript Homo_sapiens 0 451
ENST00000503859 RPS6KA2-003 protein_coding Homo_sapiens 0 2436
ENST00000506565 RPS6KA2-009 protein_coding Homo_sapiens 0 429
ENST00000507350 RPS6KA2-013 protein_coding Homo_sapiens 0 713
ENST00000507371 RPS6KA2-011 protein_coding Homo_sapiens 0 473
ENST00000509742 RPS6KA2-008 processed_transcript Homo_sapiens 0 627
ENST00000510118 RPS6KA2-005 protein_coding Homo_sapiens 0 2442
ENST00000512860 RPS6KA2-010 protein_coding Homo_sapiens 0 599
ENST00000526040 RPS6KA1-013 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000526792 RPS6KA1-009 protein_coding Homo_sapiens 0 1168
ENST00000527264 RPS6KA1-019 retained_intron Homo_sapiens 0 315
ENST00000529454 RPS6KA1-015 protein_coding Homo_sapiens 0 326
ENST00000530003 RPS6KA1-003 protein_coding Homo_sapiens 0 1168
ENST00000531113 RPS6KA1-011 retained_intron Homo_sapiens 0 1094
ENST00000531382 RPS6KA1-008 protein_coding Homo_sapiens 0 1168

Loading