C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 kinase, 90kDa, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530003 RPS6KA1-003 ENSG00000117676 9606 + 1:26543112-26575014 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000530003
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000530003 1.065±0.00 0.658±0.00 2.120±0.00 0.123±0.00 0.751±0.00 1.634±0.00 0.543±0.00 3.586±2.58 3.346±0.02 0.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168974 Rps6ka1-003 protein_coding Mus_musculus 0 2915
ENSMUST00000105894 Rps6ka1-001 protein_coding Mus_musculus 0 2822
ENSMUST00000157067 Rps6ka1-006 protein_coding Mus_musculus 0 2820
ENSMUST00000137486 Rps6ka1-004 protein_coding Mus_musculus 0 2817
ENSMUST00000174481 Rps6ka1-008 protein_coding Mus_musculus 0 2641
ENSMUST00000003741 Rps6ka1-002 protein_coding Mus_musculus 0 1871
ENSDART00000044378 rps6ka1-001 protein_coding Danio_rerio 0 1269
ENSDART00000129273 rps6ka1-004 protein_coding Danio_rerio 0 1269
ENSMUST00000024575 Rps6ka2-201 protein_coding Mus_musculus 0 1168
ENSMUST00000173989 Rps6ka1-007 retained_intron Mus_musculus 0 966
ENSMUST00000129636 Rps6ka1-005 retained_intron Mus_musculus 0 377

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