C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride intracellular channel 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024755 Clic5-201 ENSMUSG00000023959 10090 + 17:44188572-44280168 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024755
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024755 4.179±1.89 1.941±0.37 3.030±0.26 0.164±0.15 3.782±2.22 13.936±0.86 19.171±0.84 12.244±1.88 0.146±0.07 85.914±3.39 33.930±2.65 1.525±0.59 7.725±6.85 0.141±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YF CIL_0008YF_0002 VISTA 17:43851634-44453524
CIL_0007VA CIL_0007VA_0002 VISTA 17:43996915-44602724
CIL_0002LE CIL_0002LE_0002 CGP 17:44188572-44814797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002021 IMP response to dietary excess
GO:0002024 IMP diet induced thermogenesis
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0006821 IEA chloride transport
GO:0007605 IMP sensory perception of sound
GO:0008104 IMP protein localization
GO:0015629 ISS actin cytoskeleton
GO:0032420 IDA stereocilium
GO:0032421 IEA stereocilium bundle
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0050885 IMP neuromuscular process controlling balance
GO:0060088 IMP auditory receptor cell stereocilium organization
GO:0070062 IEA extracellular vesicular exosome
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000185206 CLIC5-002 protein_coding Homo_sapiens 0 917
ENST00000339561 CLIC5-003 protein_coding Homo_sapiens 0 1061
ENST00000464137 CLIC5-007 processed_transcript Homo_sapiens 4e-19 99
ENST00000484572 CLIC5-004 processed_transcript Homo_sapiens 0 237
ENST00000486570 CLIC5-005 processed_transcript Homo_sapiens 2.00386e-43 180
ENST00000487396 CLIC5-001 processed_transcript Homo_sapiens 3e-30 135
ENST00000544153 CLIC5-201 protein_coding Homo_sapiens 0 845

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