C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002LE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070584-ENSDARG00000059233 CGP 7955 20:43957029-44126740
GeneTranscriptPositionBiotype
ENSDARG00000070584 (clic5b)
chloride intracellular channel 5b 		ENSDART00000037379 (clic5b-001) 43957029-44000622 protein_coding
ENSDART00000100571 (clic5b-002) 43974041-43999740 protein_coding
CIL_0002LE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023959-ENSMUSG00000039153 CGP 10090 17:44188572-44814797
GeneTranscriptPositionBiotype
ENSMUSG00000023959 (Clic5)
chloride intracellular channel 5 		ENSMUST00000024755 (Clic5-201) 44188572-44280168 protein_coding
ENSMUSG00000038954 (Supt3)
suppressor of Ty 3 		ENSMUST00000050630 (Supt3-001) 44777152-45119290 protein_coding
ENSMUST00000127798 (Supt3-002) 44777396-45119286 protein_coding
ENSMUST00000129416 (Supt3-003) 44786631-45119279 protein_coding
ENSMUST00000130623 (Supt3-004) 44777325-44925857 processed_transcript
ENSMUSG00000039153 (Runx2)
runt related transcription factor 2 		ENSMUST00000113568 (Runx2-004) 44608001-44814797 nonsense_mediated_decay
ENSMUST00000113571 (Runx2-201) 44604001-44814797 protein_coding
ENSMUST00000113572 (Runx2-002) 44604001-44736648 protein_coding
ENSMUST00000159943 (Runx2-003) 44607531-44814581 protein_coding
ENSMUST00000160199 (Runx2-014) 44639681-44734693 protein_coding
ENSMUST00000160672 (Runx2-006) 44639777-44814264 nonsense_mediated_decay
ENSMUST00000160673 (Runx2-001) 44607905-44814627 protein_coding
ENSMUST00000161489 (Runx2-005) 44813906-44814627 retained_intron
ENSMUST00000162130 (Runx2-010) 44608315-44735366 protein_coding
ENSMUST00000162373 (Runx2-012) 44607819-44735634 protein_coding
ENSMUST00000162629 (Runx2-011) 44607819-44814226 protein_coding
ENSMUST00000162816 (Runx2-008) 44495987-44736176 nonsense_mediated_decay
ENSMUST00000162878 (Runx2-009) 44606260-44735710 protein_coding
ENSMUSG00000073394 (Runx2os1)
runt related transcription factor 2, opposite strand 1 		ENSMUST00000097320 (Runx2os1-001) 44735845-44737612 antisense
ENSMUSG00000089849 (Runx2os2)
runt related transcription factor 2, opposite strand 2 		ENSMUST00000161664 (Runx2os2-001) 44710222-44713925 antisense
ENSMUSG00000090048 (Runx2os3)
runt related transcription factor 2, opposite strand 3 		ENSMUST00000160203 (Runx2os3-001) 44561990-44563172 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LE_0001ENSDARG00000070584ENSDART00000037379ENSDART00000100571CIL_0002LE_0002ENSMUSG00000023959ENSMUST00000024755ENSMUSG00000038954ENSMUST00000050630ENSMUST00000127798ENSMUST00000129416ENSMUST00000130623ENSMUSG00000039153ENSMUST00000113568ENSMUST00000113571ENSMUST00000113572ENSMUST00000159943ENSMUST00000160199ENSMUST00000160672ENSMUST00000160673ENSMUST00000161489ENSMUST00000162130ENSMUST00000162373ENSMUST00000162629ENSMUST00000162816ENSMUST00000162878ENSMUSG00000073394ENSMUST00000097320ENSMUSG00000089849ENSMUST00000161664ENSMUSG00000090048ENSMUST00000160203
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LE_0001ENSDARG00000070584ENSDART00000037379ENSDART00000100571CIL_0002LE_0002ENSMUSG00000023959ENSMUST00000024755ENSMUSG00000038954ENSMUST00000050630ENSMUST00000127798ENSMUST00000129416ENSMUST00000130623ENSMUSG00000039153ENSMUST00000113568ENSMUST00000113571ENSMUST00000113572ENSMUST00000159943ENSMUST00000160199ENSMUST00000160673ENSMUST00000162130ENSMUST00000162373ENSMUST00000162629ENSMUST00000162816ENSMUST00000162878ENSMUSG00000073394ENSMUST00000097320ENSMUSG00000089849ENSMUST00000161664ENSMUSG00000090048ENSMUST00000160203
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070584 ENSDART00000037379 N/A N/A N/A 0.158±0.10 N/A N/A 0.025±0.00 4.990±2.92 0.649±0.00 N/A 0.077±0.00 N/A N/A N/A
ENSDART00000100571 N/A N/A N/A 0.741±0.49 N/A N/A 0.101±0.00 0.754±0.00 1.316±0.00 N/A 0.105±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023959 ENSMUST00000024755 4.179±1.89 1.941±0.37 3.030±0.26 0.164±0.15 3.782±2.22 13.936±0.86 19.171±0.84 12.244±1.88 0.146±0.07 85.914±3.39 33.930±2.65 1.525±0.59 7.725±6.85 0.141±0.05
ENSMUSG00000038954 ENSMUST00000050630 4.031±0.83 3.898±1.36 2.565±0.36 3.558±0.24 1.833±0.37 0.803±0.29 1.895±0.70 2.837±0.30 2.073±0.87 1.414±0.09 3.627±1.08 2.806±0.85 1.870±0.80 11.385±1.49
ENSMUST00000127798 0.876±0.00 1.826±0.28 N/A N/A 0.670±0.01 0.371±0.00 N/A N/A 0.565±0.24 0.626±0.02 0.583±0.00 1.280±0.28 0.421±0.00 N/A
ENSMUST00000129416 N/A N/A 0.822±0.32 8.570±0.00 1.783±1.15 0.904±0.45 0.860±0.25 1.316±0.40 0.702±0.29 0.500±0.00 0.834±0.20 5.363±7.03 3.956±2.53 11.649±11.35
ENSMUST00000130623 N/A N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039153 ENSMUST00000113568 N/A N/A N/A N/A N/A N/A N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000113571 N/A 2.642±0.21 N/A 0.142±0.04 1.135±0.14 0.397±0.08 N/A 0.191±0.00 0.119±0.09 0.557±0.07 0.012±0.00 5.239±2.15 N/A 0.369±0.05
ENSMUST00000113572 0.236±0.00 N/A 0.307±0.07 0.051±0.00 0.745±0.30 0.316±0.00 0.028±0.00 N/A 0.080±0.05 0.318±0.06 0.063±0.01 N/A 0.031±0.01 N/A
ENSMUST00000159943 N/A N/A N/A 0.426±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00
ENSMUST00000160199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A
ENSMUST00000160672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160673 0.335±0.24 5.798±0.79 N/A N/A 1.480±0.68 0.934±0.00 N/A 0.271±0.06 N/A 1.005±0.00 N/A 7.780±2.84 N/A 2.923±1.40
ENSMUST00000161489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162130 0.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.550±0.00
ENSMUST00000162373 0.347±0.19 3.579±0.29 N/A N/A 1.876±1.08 0.493±0.11 N/A N/A 0.053±0.00 1.020±0.21 N/A N/A 0.374±0.03 0.331±0.00
ENSMUST00000162629 N/A 2.998±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.621±1.28 N/A N/A
ENSMUST00000162816 0.093±0.00 N/A N/A 0.310±0.23 N/A 0.179±0.01 0.039±0.00 0.109±0.00 N/A 0.343±0.00 0.047±0.00 N/A N/A 0.517±0.00
ENSMUST00000162878 N/A 3.950±0.07 N/A N/A 2.140±0.04 0.470±0.06 N/A N/A N/A N/A N/A 3.279±0.00 0.096±0.00 N/A
ENSMUSG00000073394 ENSMUST00000097320 1.074±0.53 11.508±2.41 N/A N/A 5.997±2.67 1.460±0.34 0.266±0.00 0.540±0.20 0.091±0.00 2.454±0.53 N/A 6.818±1.46 1.078±0.00 N/A
ENSMUSG00000089849 ENSMUST00000161664 0.175±0.06 0.385±0.16 0.063±0.04 0.035±0.01 0.380±0.17 0.233±0.05 0.098±0.06 0.147±0.01 0.047±0.02 0.121±0.03 0.060±0.00 0.438±0.18 0.050±0.03 N/A
ENSMUSG00000090048 ENSMUST00000160203 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.783±2.28

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