C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride intracellular channel 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339561 CLIC5-003 ENSG00000112782 9606 - 6:45901761-46015849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverOvaryENST00000339561
Transcript ID Colon Heart Kidney Liver Ovary
ENST00000339561 1.602±0.00 4.899±0.00 0.027±0.00 0.627±0.00 0.887±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008A CIL_00008A_0003 CGP 6:45328157-46080395
CIL_0007VA CIL_0007VA_0001 VISTA 6:45579564-46182817
CIL_0008YF CIL_0008YF_0001 VISTA 6:45752763-46354264
CIL_00008G CIL_00008G_0002 CGP 6:45898451-46146699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0006810 NAS transport
GO:0006821 IDA chloride transport
GO:0007565 TAS female pregnancy
GO:0015629 IDA actin cytoskeleton
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0070062 IDA extracellular vesicular exosome
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024755 Clic5-201 protein_coding Mus_musculus 0 1061
ENSDART00000100571 clic5b-002 protein_coding Danio_rerio 0 387
ENSDART00000037379 clic5b-001 protein_coding Danio_rerio 0 387

Loading