C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peripherin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024773 Prph2-001 ENSMUSG00000023978 10090 + 17:46910459-46924933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000024773
Transcript ID Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000024773 0.006±0.00 0.009±0.00 0.011±0.00 0.022±0.01 0.018±0.02 0.076±0.02 0.004±0.00 0.866±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UG CIL_0006UG_0002 CGP 17:46910459-47010532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007601 IEA visual perception
GO:0009645 IEA response to low light intensity stimulus
GO:0016021 IEA integral component of membrane
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230381 PRPH2-001 protein_coding Homo_sapiens 0 1236

Loading