C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protease, serine 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024833 Tmprss3-002 ENSMUSG00000024034 10090 - 17:31179272-31197749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000024833
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000024833 0.012±0.00 0.010±0.01 0.059±0.02 0.031±0.01 0.019±0.01 0.300±0.16 0.048±0.01 0.045±0.02 0.125±0.10 0.035±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0002 VISTA 17:31053737-31653776
CIL_00036F CIL_00036F_0002 CGP 17:31161396-31198975
CIL_00036C CIL_00036C_0002 CGP 17:31179272-31242202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005783 IDA endoplasmic reticulum
GO:0005789 ISO endoplasmic reticulum membrane
GO:0006508 IEA proteolysis
GO:0006883 ISO cellular sodium ion homeostasis
GO:0006898 IEA receptor-mediated endocytosis
GO:0007605 IMP sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0017080 ISO sodium channel regulator activity
GO:0043025 IDA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291532 TMPRSS3-001 protein_coding Homo_sapiens 0 1445
ENST00000398405 TMPRSS3-004 protein_coding Homo_sapiens 0 1434
ENST00000433957 TMPRSS3-002 protein_coding Homo_sapiens 0 1458
ENST00000474596 TMPRSS3-006 processed_transcript Homo_sapiens 0 1201
ENST00000476848 TMPRSS3-007 retained_intron Homo_sapiens 0 682
ENST00000482761 TMPRSS3-005 retained_intron Homo_sapiens 0 1323

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