C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protease, serine 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433957 TMPRSS3-002 ENSG00000160183 9606 - 21:42371890-42396059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000433957
Transcript ID Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000433957 0.072±0.00 0.547±0.00 0.020±0.00 0.161±0.00 0.104±0.00 6.403±4.51 0.256±0.14 0.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0001 VISTA 21:42290762-42894212
CIL_00036F CIL_00036F_0001 CGP 21:42362282-42396846
CIL_00036C CIL_00036C_0001 CGP 21:42371890-42447681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 NAS:IEA serine-type endopeptidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006508 NAS:IEA proteolysis
GO:0006883 IDA cellular sodium ion homeostasis
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0017080 IDA sodium channel regulator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024833 Tmprss3-002 protein_coding Mus_musculus 0 1458
ENSMUST00000114549 Tmprss3-001 protein_coding Mus_musculus 0 1456

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