C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024873 Yipf4-201 ENSMUSG00000024072 10090 + 17:74489493-74500277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024873 15.796±3.34 175.856±25.74 17.044±2.32 8.180±2.78 44.059±35.18 58.355±18.38 8.563±0.87 18.256±9.34 11.904±3.90 50.653±23.35 5.865±0.22 77.223±43.78 12.136±4.46 7.170±3.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MY CIL_0000MY_0002 CGP 17:74426295-74500277
CIL_0003JH CIL_0003JH_0003 CGP 17:74489493-74703356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238831 YIPF4-001 protein_coding Homo_sapiens 0 1548
ENST00000437765 YIPF4-003 nonsense_mediated_decay Homo_sapiens 0 656
ENST00000495355 YIPF4-002 retained_intron Homo_sapiens 0 303

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