C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565223 ATP6V0C-004 ENSG00000185883 9606 + 16:2514294-2519920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartOvaryPlacentaTestisENST00000565223
Transcript ID Adipose Adrenal Brain Breast Colon Heart Ovary Placenta Testis
ENST00000565223 112.859±0.00 123.537±0.00 112.280±97.88 121.570±0.00 113.885±0.00 1.398±0.00 154.030±80.25 144.141±88.38 154.670±6.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000299 CIL_000299_0002 CGP 16:2496032-2520223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098862 Atp6v0c-003 protein_coding Mus_musculus 0 617
ENSMUST00000024932 Atp6v0c-001 protein_coding Mus_musculus 0 617
ENSMUST00000151061 Atp6v0c-002 processed_transcript Mus_musculus 0 617
ENSMUST00000122373 Gm15487-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000148541 Atp6v0c-004 protein_coding Mus_musculus 0 424
ENSMUST00000156061 Atp6v0c-006 processed_transcript Mus_musculus 0 289
ENSMUST00000150647 Atp6v0c-005 protein_coding Mus_musculus 0 279

Loading