C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025057 Taf11-201 ENSMUSG00000024218 10090 - 17:27901128-27907724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025057
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025057 5.799±0.18 15.887±2.99 8.294±1.38 2.538±0.60 2.747±0.36 4.512±1.09 4.951±1.31 8.477±6.03 4.348±1.10 10.327±0.98 11.380±4.68 13.833±2.76 7.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EW CIL_0002EW_0002 CGP 17:27856490-27909242
CIL_0002EV CIL_0002EV_0002 CGP 17:27901122-28062600

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0005669 ISO transcription factor TFIID complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361288 TAF11-001 protein_coding Homo_sapiens 0 647
ENST00000420584 TAF11-201 protein_coding Homo_sapiens 0 385
ENST00000452449 UHRF1BP1-201 protein_coding Homo_sapiens 4e-18 99

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