C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DCP2 decapping enzyme homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025350 Dcp2-201 ENSMUSG00000024472 10090 + 18:44380500-44424969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025350
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025350 3.553±1.29 4.035±0.40 2.468±0.54 5.318±0.56 3.053±0.61 3.272±0.20 1.601±0.27 2.564±0.26 2.382±0.84 4.574±0.12 1.224±0.14 4.297±0.77 5.452±1.27 1.320±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UM CIL_0004UM_0002 CGP 18:44380500-44812182

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 IEA cytoplasmic mRNA processing body
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006402 IMP mRNA catabolic process
GO:0016442 IEA RISC complex
GO:0030145 IEA manganese ion binding
GO:0050072 ISS m7G(5')pppN diphosphatase activity
GO:0071044 ISS histone mRNA catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389063 DCP2-001 protein_coding Homo_sapiens 0 1818
ENST00000502635 DCP2-008 retained_intron Homo_sapiens 0 737
ENST00000508359 DCP2-006 retained_intron Homo_sapiens 0 660
ENST00000510046 DCP2-007 retained_intron Homo_sapiens 0 374
ENST00000512751 DCP2-005 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000513585 DCP2-003 protein_coding Homo_sapiens 0 1286
ENST00000515408 DCP2-002 protein_coding Homo_sapiens 0 1284

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