C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172795-ENSG00000171444 CGP 9606 5:112976702-113488830
GeneTranscriptPositionBiotype
ENSG00000171444 (MCC)
mutated in colorectal cancers 		ENST00000302475 (MCC-001) 113022099-113294949 protein_coding
ENST00000408903 (MCC-003) 113027302-113488830 protein_coding
ENST00000502648 (MCC-004) 113101500-113122830 retained_intron
ENST00000505604 (MCC-008) 113101543-113104625 retained_intron
ENST00000506605 (MCC-007) 113101734-113203317 processed_transcript
ENST00000511242 (MCC-010) 113448123-113488823 processed_transcript
ENST00000511847 (MCC-006) 113101734-113204576 processed_transcript
ENST00000514701 (MCC-009) 113048876-113294938 protein_coding
ENST00000515367 (MCC-011) 113026132-113234677 protein_coding
ENST00000624689 (MCC-012) 113048563-113064040 protein_coding
ENSG00000172795 (DCP2)
decapping mRNA 2 		ENST00000389063 (DCP2-001) 112976736-113020970 protein_coding
ENST00000502635 (DCP2-008) 112985832-113001215 retained_intron
ENST00000504961 (DCP2-004) 112976813-112984651 processed_transcript
ENST00000508359 (DCP2-006) 113001126-113008307 retained_intron
ENST00000510046 (DCP2-007) 112976794-112986010 retained_intron
ENST00000512751 (DCP2-005) 112976942-113007989 nonsense_mediated_decay
ENST00000513585 (DCP2-003) 112976710-113013849 protein_coding
ENST00000515408 (DCP2-002) 112976702-113020123 protein_coding
ENSG00000212122 (TSSK1B)
testis-specific serine kinase 1B 		ENST00000390666 (TSSK1B-001) 113432554-113435031 protein_coding
ENSG00000232633 (CTD-2201G3.1)
 ENST00000416046 (CTD-2201G3.1-001) 113323028-113436341 antisense
ENST00000510381 (CTD-2201G3.1-002) 113435079-113437174 antisense
ENSG00000277074 (AC126917.1)
 ENST00000410785 (AC126917.1-201) 113327765-113327857 miRNA
CIL_0004UM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024472-ENSMUSG00000071856 CGP 10090 18:44380500-44812182
GeneTranscriptPositionBiotype
ENSMUSG00000024472 (Dcp2)
DCP2 decapping enzyme homolog (S. cerevisiae) 		ENSMUST00000025350 (Dcp2-201) 44380500-44424969 protein_coding
ENSMUSG00000071856 (Mcc)
mutated in colorectal cancers 		ENSMUST00000089874 (Mcc-201) 44425061-44812182 protein_coding
ENSMUST00000164666 (Mcc-202) 44425061-44662266 protein_coding
ENSMUSG00000097610 (A930012L18Rik)
RIKEN cDNA A930012L18 gene 		ENSMUST00000181094 (A930012L18Rik-201) 44661665-44676271 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UM_0001ENSG00000171444ENST00000302475ENST00000408903ENST00000502648ENST00000505604ENST00000506605ENST00000511242ENST00000511847ENST00000514701ENST00000515367ENST00000624689ENSG00000172795ENST00000389063ENST00000502635ENST00000504961ENST00000508359ENST00000510046ENST00000512751ENST00000513585ENST00000515408ENSG00000212122ENST00000390666ENSG00000232633ENST00000416046ENST00000510381ENSG00000277074ENST00000410785CIL_0004UM_0002ENSMUSG00000024472ENSMUST00000025350ENSMUSG00000071856ENSMUST00000089874ENSMUST00000164666ENSMUSG00000097610ENSMUST00000181094
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UM_0001ENSG00000171444ENST00000302475ENST00000408903ENST00000506605ENST00000511847ENST00000515367ENST00000624689ENSG00000172795ENST00000389063ENST00000502635ENST00000504961ENST00000515408ENSG00000212122ENST00000390666ENSG00000232633ENST00000416046ENST00000510381ENSG00000277074ENST00000410785CIL_0004UM_0002ENSMUSG00000024472ENSMUST00000025350ENSMUSG00000071856ENSMUST00000089874ENSMUST00000164666ENSMUSG00000097610ENSMUST00000181094
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171444 ENST00000302475 3.222±0.00 0.486±0.00 0.486±0.00 1.232±0.30 1.157±0.23 1.305±0.00 2.721±0.30 1.559±0.00 2.540±1.55 1.060±0.35 0.386±0.27 5.200±4.66 1.886±1.33 1.103±0.00
ENST00000408903 N/A N/A N/A N/A N/A N/A N/A N/A 2.660±0.00 N/A N/A N/A N/A N/A
ENST00000502648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506605 N/A N/A N/A N/A N/A N/A 7.421±0.00 N/A 8.422±0.00 N/A N/A N/A N/A N/A
ENST00000511242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511847 N/A N/A N/A 2.440±0.00 N/A N/A N/A 7.591±0.00 N/A 4.310±0.00 N/A 11.933±0.00 N/A N/A
ENST00000514701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515367 N/A N/A 0.649±0.00 0.429±0.00 N/A N/A N/A 1.293±0.00 2.152±0.00 N/A 1.061±0.00 3.129±0.00 N/A N/A
ENST00000624689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.505±0.00 N/A N/A N/A
ENSG00000172795 ENST00000389063 2.155±0.00 0.426±0.00 N/A 2.759±0.27 2.228±0.35 0.486±0.04 1.195±0.00 0.761±0.18 0.666±0.25 3.038±0.16 N/A 0.952±0.55 3.880±2.99 1.705±0.28
ENST00000502635 N/A N/A 8.153±0.00 N/A N/A N/A N/A N/A N/A N/A 3.078±0.00 N/A N/A N/A
ENST00000504961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.939±0.00 N/A 2.988±0.00
ENST00000508359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515408 N/A N/A 1.830±0.00 1.786±0.00 1.865±0.00 1.645±0.00 0.784±0.00 1.536±0.00 3.210±0.00 3.746±0.00 0.654±0.00 3.934±0.00 N/A N/A
ENSG00000212122 ENST00000390666 0.007±0.00 N/A N/A 0.015±0.00 0.026±0.01 0.006±0.00 0.015±0.01 N/A 0.006±0.00 N/A N/A 0.062±0.03 0.037±0.02 20.285±5.22
ENSG00000232633 ENST00000416046 N/A N/A N/A 0.029±0.00 N/A N/A N/A 0.057±0.00 N/A N/A N/A 0.043±0.00 0.049±0.03 N/A
ENST00000510381 0.009±0.00 0.053±0.00 0.085±0.00 0.048±0.00 N/A N/A 0.065±0.00 N/A 0.008±0.00 0.008±0.00 N/A 0.181±0.12 0.069±0.02 N/A
ENSG00000277074 ENST00000410785 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.245±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024472 ENSMUST00000025350 3.553±1.29 4.035±0.40 2.468±0.54 5.318±0.56 3.053±0.61 3.272±0.20 1.601±0.27 2.564±0.26 2.382±0.84 4.574±0.12 1.224±0.14 4.297±0.77 5.452±1.27 1.320±0.30
ENSMUSG00000071856 ENSMUST00000089874 1.818±0.00 1.299±0.50 N/A 0.727±0.37 1.209±0.86 3.304±0.52 N/A 1.068±0.00 5.415±0.78 N/A N/A 2.629±0.68 0.153±0.00 0.243±0.00
ENSMUST00000164666 3.513±1.88 N/A 1.540±0.00 1.515±0.36 1.026±0.61 0.623±0.08 3.321±0.71 1.493±0.97 1.505±0.00 4.048±0.26 0.520±0.15 1.591±0.96 0.699±0.35 0.204±0.13
ENSMUSG00000097610 ENSMUST00000181094 4.673±0.00 N/A N/A N/A 2.693±0.24 N/A N/A N/A N/A N/A N/A 3.222±0.62 N/A 0.141±0.00

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