C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025497 Fbn2-201 ENSMUSG00000024598 10090 - 18:58008623-58209926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000025497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000025497 1.114±0.87 0.064±0.02 0.036±0.00 2.304±1.60 0.421±0.10 0.439±0.09 0.156±0.03 0.016±0.01 0.269±0.32 0.158±0.03 0.018±0.01 9.846±1.84 1.507±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041L CIL_00041L_0002 CGP 18:57878678-58209926
CIL_00041M CIL_00041M_0002 CGP 18:58008623-58612773

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001527 TAS microfibril
GO:0005201 IEA extracellular matrix structural constituent
GO:0005509 TAS calcium ion binding
GO:0005576 TAS extracellular region
GO:0030326 IMP embryonic limb morphogenesis
GO:0030501 IMP positive regulation of bone mineralization
GO:0031012 IDA extracellular matrix
GO:0035108 IMP limb morphogenesis
GO:0035583 IMP sequestering of TGFbeta in extracellular matrix
GO:0045669 IMP positive regulation of osteoblast differentiation
GO:0060346 IMP bone trabecula formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000008681 fbn2b-201 protein_coding Danio_rerio 0 2292
ENST00000262464 FBN2-201 protein_coding Homo_sapiens 0 10060
ENST00000316623 FBN1-001 protein_coding Homo_sapiens 0 593
ENST00000502468 FBN2-004 protein_coding Homo_sapiens 0 1120
ENST00000507835 FBN2-006 protein_coding Homo_sapiens 0 1382
ENST00000508053 FBN2-001 protein_coding Homo_sapiens 0 10060
ENST00000508989 FBN2-005 protein_coding Homo_sapiens 0 4573
ENST00000511489 FBN2-007 processed_transcript Homo_sapiens 0 634
ENST00000514742 FBN2-003 retained_intron Homo_sapiens 0 1120
ENST00000559133 FBN1-004 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000619499 FBN2-202 protein_coding Homo_sapiens 0 10000
ENST00000620257 FBN2-203 protein_coding Homo_sapiens 0 1107

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