C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262464 FBN2-201 ENSG00000138829 9606 - 5:128257909-128538042 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverOvaryPlacentaENST00000262464
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Ovary Placenta
ENST00000262464 0.019±0.00 0.116±0.00 0.039±0.00 1.130±0.00 0.079±0.00 0.197±0.00 0.203±0.00 18.081±3.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041L CIL_00041L_0001 CGP 5:128083766-128659185
CIL_00041M CIL_00041M_0001 CGP 5:128257909-129033642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001527 TAS microfibril
GO:0005201 IEA extracellular matrix structural constituent
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 TAS:IEA proteinaceous extracellular matrix
GO:0009653 TAS anatomical structure morphogenesis
GO:0016020 IEA membrane
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0030501 ISS positive regulation of bone mineralization
GO:0031012 IDA extracellular matrix
GO:0035583 ISS sequestering of TGFbeta in extracellular matrix
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0060346 ISS bone trabecula formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025497 Fbn2-201 protein_coding Mus_musculus 0 10060
ENSDART00000008681 fbn2b-201 protein_coding Danio_rerio 0 1892
ENSMUST00000103234 Fbn1-003 protein_coding Mus_musculus 0 854
ENSMUST00000028633 Fbn1-001 protein_coding Mus_musculus 0 854

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