C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 7 superfamily member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025713 Tm7sf2-001 ENSMUSG00000024799 10090 - 19:6062821-6067842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000025713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000025713 18.372±1.34 42.626±2.92 15.790±3.23 26.472±2.43 20.730±2.96 33.865±3.42 16.522±1.46 140.698±94.25 17.881±0.89 3.763±0.68 23.587±3.73 23.250±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006695 IEA cholesterol biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016628 IEA oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0043235 ISO receptor complex
GO:0050613 IEA delta14-sterol reductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279263 TM7SF2-001 protein_coding Homo_sapiens 0 1314
ENST00000345348 TM7SF2-003 protein_coding Homo_sapiens 0 898
ENST00000524690 TM7SF2-013 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000524986 TM7SF2-023 protein_coding Homo_sapiens 0 717
ENST00000525385 TM7SF2-007 protein_coding Homo_sapiens 0 935
ENST00000526048 TM7SF2-016 retained_intron Homo_sapiens 0 377
ENST00000526085 TM7SF2-025 protein_coding Homo_sapiens 0 411
ENST00000526809 TM7SF2-024 protein_coding Homo_sapiens 0 444
ENST00000527851 TM7SF2-014 retained_intron Homo_sapiens 0 243
ENST00000527968 TM7SF2-020 protein_coding Homo_sapiens 0 508
ENST00000528026 TM7SF2-012 retained_intron Homo_sapiens 0 230
ENST00000528802 TM7SF2-018 protein_coding Homo_sapiens 0 636
ENST00000529233 TM7SF2-011 retained_intron Homo_sapiens 0 619
ENST00000529292 TM7SF2-002 nonsense_mediated_decay Homo_sapiens 0 736
ENST00000529414 TM7SF2-028 protein_coding Homo_sapiens 0 490
ENST00000529601 TM7SF2-004 nonsense_mediated_decay Homo_sapiens 0 1020
ENST00000530650 TM7SF2-005 retained_intron Homo_sapiens 0 1090
ENST00000530750 TM7SF2-027 protein_coding Homo_sapiens 0 289
ENST00000530892 TM7SF2-022 retained_intron Homo_sapiens 0 446
ENST00000531029 TM7SF2-021 processed_transcript Homo_sapiens 0 230
ENST00000531321 TM7SF2-008 protein_coding Homo_sapiens 0 641
ENST00000532328 TM7SF2-017 retained_intron Homo_sapiens 0 545
ENST00000533646 TM7SF2-009 processed_transcript Homo_sapiens 0 217
ENST00000533766 TM7SF2-010 retained_intron Homo_sapiens 0 435
ENST00000534371 TM7SF2-026 protein_coding Homo_sapiens 0 542

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